Protein Alignment Sox21b and Sry2

DIOPT Version :10

• Sequence 1: NP_001261829.1
• Gene: Sox21b / 39569
• FlyBaseID: FBgn0042630
• Length: 587
• Species: Drosophila melanogaster
• Sequence 2: NP_001396294.1
• Gene: Sry2 / 103694552
• RGDID: 9439292
• Length: 156
• Species: Rattus norvegicus
• Alignment Length: 241
• Identity: 74/241 - (30%)
• Similarity: 97/241 - (40%)
• Gaps: 107/241 - (44%)

  Fly   245 EEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMHM 309
            |..:||||||||||||.:|.|:||.||.|.||||||:||.:||.|||.|||||..||:||:.:|.
  Rat     2 EGQVKRPMNAFMVWSRGERHKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLKTLHR 66

  Fly   310 KEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGITPGYFAPGPTAAAYHLGSHLGQTST 374
            :::|:|||:|.|:.|..:|
  Rat    67 EKYPNYKYQPHRRVKVPQR---------------------------------------------- 85

  Fly   375 PTTTQATLSGQMDKFALERSSYLSNSSQASAYSAYLDPSVLTKAY----FDSKMYQDRAANYAFD 435
                                ||......||           ||.|    :|:.::
  Rat    86 --------------------SYTLQREVAS-----------TKLYNLLQWDNNLH---------- 109

  Fly   436 ISKIYGAQQHAAAHHQQQQQQ---------------QQQQQQQQQQ 466
             :.|||.....|||...:.|:               ||:|||||.|
  Rat   110 -TIIYGQDWARAAHQSSKNQKSIYLQPVDIPTGYPLQQKQQQQQHQ 154

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21b	NP_001261829.1	HMG-box_SoxB	246..325	CDD:438790	48/78 (62%)
Sry2	NP_001396294.1	HMG-box_SoxA_SoxB_SoxG	4..79	CDD:438837	47/74 (64%)