DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21a and NHP6A

DIOPT Version :10

Sequence 1:NP_001261827.1 Gene:Sox21a / 39567 FlyBaseID:FBgn0036411 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_015377.1 Gene:NHP6A / 856165 SGDID:S000006256 Length:93 Species:Saccharomyces cerevisiae


Alignment Length:54 Identity:19/54 - (35%)
Similarity:34/54 - (62%) Gaps:2/54 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAK 175
            ||.::|:|.::...|..:..:||.:...::.|:||.:||.||..:|:|:  |||
Yeast    22 KRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPY--EAK 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21aNP_001261827.1 HMG-box_SoxB 119..198 CDD:438790 19/54 (35%)
NHP6ANP_015377.1 HMG-box_NHP6-like 17..88 CDD:438792 19/54 (35%)

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