Protein Alignment Sox21a and Sox12

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_001162121.1
• Gene: Sox12 / 689988
• RGDID: 1586313
• Length: 314
• Species: Rattus norvegicus
• Alignment Length: 169
• Identity: 72/169 - (42%)
• Similarity: 87/169 - (51%)
• Gaps: 24/169 - (14%)

  Fly    77 PPAAPTPVAPKMHQHTHHHGNSHHNAPTSHSNSNTGSHHNSHDHIKRPMNAFMVWSRGQRRKMAQ 141
            ||..|.|.|....:                    .|.......|||||||||||||:.:|||:..
  Rat    16 PPPGPGPAAEGARE--------------------PGWCKTPSGHIKRPMNAFMVWSQHERRKIMD 60

  Fly   142 DNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPK--TLNKSPV 204
            ..|.|||:|||||||..|:||.:.:|.||:.||:|||..||.::||||||||:|.|  .....|.
  Rat    61 QWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAPAKARPR 125

  Fly   205 PGGGGGGGGGGANGGVNAGGAGNSGPSGP--GSVGSPKD 241
            |.||||||.....|....|..|.....||  |...:|:|
  Rat   126 PPGGGGGGSRLKPGPQLPGRGGRRATGGPLGGGAAAPED 164

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	50/80 (63%)
Sox12	NP_001162121.1	HMG-box_SF	29..116	CDD:469606	50/106 (47%)