DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21a and SOX5

DIOPT Version :10

Sequence 1:NP_001261827.1 Gene:Sox21a / 39567 FlyBaseID:FBgn0036411 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_011519134.2 Gene:SOX5 / 6660 HGNCID:11201 Length:828 Species:Homo sapiens


Alignment Length:102 Identity:48/102 - (47%)
Similarity:68/102 - (66%) Gaps:2/102 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 GNSHHNAPTSHSN--SNTGSHHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAE 158
            |:|..:|..|.|.  ..:....::..||||||||||||::.:|||:.|..|.||||.|||.||:.
Human   594 GDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSR 658

  Fly   159 WKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRK 195
            ||.:|..:|:|:.:|..||...|::::|||||:||.|
Human   659 WKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPK 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21aNP_001261827.1 HMG-box_SoxB 119..198 CDD:438790 43/77 (56%)
SOX5XP_011519134.2 HMG-box_EGL13-like 619..696 CDD:438848 43/77 (56%)

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