DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21a and SOX4

DIOPT Version :9

Sequence 1:NP_001261827.1 Gene:Sox21a / 39567 FlyBaseID:FBgn0036411 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_003098.1 Gene:SOX4 / 6659 HGNCID:11200 Length:474 Species:Homo sapiens


Alignment Length:405 Identity:126/405 - (31%)
Similarity:165/405 - (40%) Gaps:111/405 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 NAPTSHSNSNTGSHHNS-------HDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAE 158
            ::||..|.::||...:.       ..|||||||||||||:.:|||:.:.:|.|||:|||||||..
Human    32 SSPTPGSTASTGGKADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKR 96

  Fly   159 WKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLN--------KSPVPG--------- 206
            ||||.:..|.|||.||:|||..||.::||||||||:|.|:.|        .|..||         
Human    97 WKLLKDSDKIPFIREAERLRLKHMADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGS 161

  Fly   207 GGGGGGGGGANGGVNAGGAGNSGPSGPGSVGSPKDMQPQLSPL------GQSLPH----LHG--- 258
            ||||.||||..|..|||| |..|.||.|:...|...:...|.:      |.|.||    |.|   
Human   162 GGGGHGGGGGGGSSNAGG-GGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGG 225

  Fly   259 ----------------------------HPHQSPYQSHPHHPHPHPHHVQLAAATLSAK------ 289
                                        ..|.|.|::..............|:|.|:|.      
Human   226 GGKAAAAAAASFAAEQAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAALAAPGKHLAE 290

  Fly   290 ------YGFGSPLELSLPRLPNAFPGLAHYPLDPTLAL-------------DLQARLQAMYAGSI 335
                  |.||.   |.....|....|....|.|| |.|             .|..|..|..:.:.
Human   291 KKVKRVYLFGG---LGTSSSPVGGVGAGADPSDP-LGLYEEEGAGCSPDAPSLSGRSSAASSPAA 351

  Fly   336 ------YHPWRYLPLISPETPPSPPSSSGTGISSYGCVKSEKSSPNAVVASAASPPNIIXPTP-- 392
                  :..:..|...|| .|.|.||.:.:..||:   .|..||..:..:......:::...|  
Human   352 GRSPADHRGYASLRAASP-APSSAPSHASSSASSH---SSSSSSSGSSSSDDEFEDDLLDLNPSS 412

  Fly   393 ----LRFGAGTSSSA 403
                :..|:.:||||
Human   413 NFESMSLGSFSSSSA 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21aNP_001261827.1 SOX-TCF_HMG-box 120..191 CDD:238684 46/70 (66%)
SOX4NP_003098.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 5/25 (20%)
SOX-TCF_HMG-box 58..129 CDD:238684 46/70 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..228 36/100 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..286 4/23 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..416 24/118 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148494
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1275
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10270
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.790

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