DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21a and SOX3

DIOPT Version :10

Sequence 1:NP_001261827.1 Gene:Sox21a / 39567 FlyBaseID:FBgn0036411 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_005625.2 Gene:SOX3 / 6658 HGNCID:11199 Length:446 Species:Homo sapiens


Alignment Length:391 Identity:134/391 - (34%)
Similarity:161/391 - (41%) Gaps:142/391 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PMPPADLA-----------------VPPAAPT-------PVAPKMHQHTHHHGNSHHNAPTSHSN 108
            |.|||.||                 .|...||       |.||      ...|.|..|| ...:|
Human    61 PSPPATLAHLLPAPAMYSLLETELKNPVGTPTQAAGTGGPAAP------GGAGKSSANA-AGGAN 118

  Fly   109 SNTGSHHNS--------HDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEG 165
            |..||...:        .|.:|||||||||||||||||||.:|||||||||||||||:|||||:.
Human   119 SGGGSSGGASGGGGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDA 183

  Fly   166 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTL---NKSPVPGGGGGGGGGGANGGVNAGGAGN 227
            :|||||||||||||:||||:||||||||||.|||   :|..:|.|....|...|.....|..|..
Human   184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPSGLLPPGAAAAAAAAAAAAAAA 248

  Fly   228 SGPSGPGSVGSPKDMQPQLSPLGQSLPHLHGHPHQSPYQSHPHHPHPHPHHVQLAAATLSAKYGF 292
            |.|.|   ||...|          :..|::|..:.                   |.:.:..:.|:
Human   249 SSPVG---VGQRLD----------TYTHVNGWANG-------------------AYSLVQEQLGY 281

  Fly   293 GSPLELSLPRLPNAFPGLAHYPLDPTLALDLQARLQAMYAGSIYHPWRYLPLISPETPPS----- 352
            ..|..:|.|..|.|.|.:..|.:                ||..|         ||..||.     
Human   282 AQPPSMSSPPPPPALPPMHRYDM----------------AGLQY---------SPMMPPGAQSYM 321

  Fly   353 ---------------PPSSSGTGISSYG-----------------------CVKSEKSSPNAVVA 379
                           .||::....::||                       .||||.|||...:|
Human   322 NVAAAAAAASGYGGMAPSATAAAAAAYGQQPATAAAAAAAAAAMSLGPMGSVVKSEPSSPPPAIA 386

  Fly   380 S 380
            |
Human   387 S 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21aNP_001261827.1 HMG-box_SoxB 119..198 CDD:438790 67/78 (86%)
SOX3NP_005625.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..48
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..140 15/59 (25%)
HMG-box_SoxB 137..212 CDD:438790 64/74 (86%)
SOXp 208..302 CDD:463537 32/125 (26%)
9aaTAD. /evidence=ECO:0000269|PubMed:34342803 399..407
Blue background indicates that the domain is not in the aligned region.

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