DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21a and SOX17

DIOPT Version :10

Sequence 1:NP_001261827.1 Gene:Sox21a / 39567 FlyBaseID:FBgn0036411 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_071899.1 Gene:SOX17 / 64321 HGNCID:18122 Length:414 Species:Homo sapiens


Alignment Length:467 Identity:122/467 - (26%)
Similarity:162/467 - (34%) Gaps:179/467 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GYTSSGSSNHSHSSSLSPQLPGINLGLGMVGGLGMGMSVGVGSGSGNTTPPP-----MPPADLAV 76
            ||.|...|....:      ||.:..|||                     |.|     .|..|:.|
Human     7 GYASDDQSQTQSA------LPAVMAGLG---------------------PCPWAESLSPIGDMKV 44

  Fly    77 PPAAPTPVAPKMHQHTHHHGNSHHNAPTSHSNSNTGSHHNSHDHIKRPMNAFMVWSRGQRRKMAQ 141
            ...||                ::..||...:....|     ...|:|||||||||::.:|:::||
Human    45 KGEAP----------------ANSGAPAGAAGRAKG-----ESRIRRPMNAFMVWAKDERKRLAQ 88

  Fly   142 DNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKSPVPG 206
            .||.:||:|:||.||..||.||..:||||::||:|||..||::||:|||||||:.:......|.|
Human    89 QNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEG 153

  Fly   207 GG------------GGGGGGGANGGVNAGGAGNSGPSGP--------------GSVGSPK----- 240
            |.            |..||..|..|:.........|:||              .|:|:|.     
Human   154 GFLHGLAEPQAAALGPEGGRVAMDGLGLQFPEQGFPAGPPLLPPHMGGHYRDCQSLGAPPLDGYP 218

  Fly   241 --------------------------------------------------DMQPQL--SPLGQSL 253
                                                              .|.|:|  .|.|.|:
Human   219 LPTPDTSPLDGVDPDPAFFAAPMPGDCPAAGTYSYAQVSDYAGPPEPPAGPMHPRLGPEPAGPSI 283

  Fly   254 PHLHGHPHQ---------SP-------YQSHP--HHPHPHPHHVQLAAATLSAKYGFGSPLELSL 300
            |.|...|..         ||       :|..|  .|.|.|.||..          |.|.|   |.
Human   284 PGLLAPPSALHVYYGAMGSPGAGGGRGFQMQPQHQHQHQHQHHPP----------GPGQP---SP 335

  Fly   301 PRLPNAFPGLAHYPLDPTLALDLQARLQ----AMYAGSIYHPWRYLPLISPETPPSPPSSSGTGI 361
            |  |.|.|  .....||:...:|...:.    ..|...:..|...||....::..:.|.|.| .|
Human   336 P--PEALP--CRDGTDPSQPAELLGEVDRTEFEQYLHFVCKPEMGLPYQGHDSGVNLPDSHG-AI 395

  Fly   362 SSYGCVKSEKSS 373
            ||   |.|:.||
Human   396 SS---VVSDASS 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21aNP_001261827.1 HMG-box_SoxB 119..198 CDD:438790 46/78 (59%)
SOX17NP_071899.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 5/20 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..66 8/50 (16%)
HMG-box_SoxF_SOX17 62..142 CDD:438850 46/84 (55%)
Sox17_18_mid 203..253 CDD:463454 3/49 (6%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..286 7/29 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..352 17/63 (27%)
9aaTAD. /evidence=ECO:0000269|PubMed:34342803 361..369 1/7 (14%)

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