Sequence 1: | NP_001261827.1 | Gene: | Sox21a / 39567 | FlyBaseID: | FBgn0036411 | Length: | 407 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_571719.1 | Gene: | sox9b / 60642 | ZFINID: | ZDB-GENE-001103-2 | Length: | 407 | Species: | Danio rerio |
Alignment Length: | 411 | Identity: | 116/411 - (28%) |
---|---|---|---|
Similarity: | 154/411 - (37%) | Gaps: | 115/411 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 SHSSSLSPQLPGINLGLGMVGGLGMGMSVGVGSGSGNTTPPPMPPADLAVPPAAPTPVAPKMHQH 91
Fly 92 THHHGNSHHNAPTSHSNSNTGSHHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG 156
Fly 157 AEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKSPVPGGGGGGGG-------- 213
Fly 214 ------------GGANGGVNAGG--AGNS-GPSGPGSVGSPKDMQPQLSPLGQSLPHLHGHPHQS 263
Fly 264 PYQSH-------------------------------PHHPHPHPHHVQLAAATLSAKYGFGS--- 294
Fly 295 -PLELSLPRLPNA---------------FPGLAHYPLDPTLALDLQARL-QAMYA------GSIY 336
Fly 337 HPWRYLPLISPETPPSPPSSS 357 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sox21a | NP_001261827.1 | SOX-TCF_HMG-box | 120..191 | CDD:238684 | 44/70 (63%) |
sox9b | NP_571719.1 | Sox_N | 16..80 | CDD:372113 | 16/72 (22%) |
SOX-TCF_HMG-box | 90..160 | CDD:238684 | 43/69 (62%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170582346 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |