Protein Alignment Sox21a and sox5

DIOPT Version :9

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: XP_021330769.1
• Gene: sox5 / 567413
• ZFINID: ZDB-GENE-000607-13
• Length: 763
• Species: Danio rerio
• Alignment Length: 301
• Identity: 74/301 - (24%)
• Similarity: 105/301 - (34%)
• Gaps: 140/301 - (46%)

  Fly    23 SSNHSHSSSLSPQLPGINLGLGMVGGLGMGMSVGVGSGSGN-TTPPPMP------PADLAVPPAA 80
            |....||:     :|..||..|.       :|...|....| :||||.|      |.:|:..|.|
Zfish   348 SPGAKHST-----VPQANLATGT-------LSPTSGQSEKNRSTPPPKPKDEGAQPLNLSSKPKA 400

  Fly    81 -----PT-PVAPKMHQHTHHHGNSHHNAPTS-------------HSNSNTGSHHNSHD------- 119
                 || |.:|::.......|:..|:||:|             .|:..:..:.|.|:
Zfish   401 SESKSPTSPASPQVPALKLGPGSLKHSAPSSIGGPPSRLSSIDLLSSITSAGYLNDHEAVTKAFQ 465

  Fly   120 ----------------------------------------------------------------- 119
                                                                             
Zfish   466 EARKMKEQLKREEQVLDAKVAAVNSLSLNNGRSEKVRFMEKAALESLSQQLKQSEESKFTHAMMD 530

  Fly   120 ------------------------------HIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKR 154
                                          ||||||||||||::.:|||:.|..|.||||.|||.
Zfish   531 FGISGDSDGSPSVSDSRIFREARGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 595

  Fly   155 LGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRK 195
            ||:.||.:|..:|:|:.:|..||...|::::|||||:||.|
Zfish   596 LGSRWKSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPK 636

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	SOX-TCF_HMG-box	120..191	CDD:238684	39/70 (56%)
sox5	XP_021330769.1	SSL_OB	332..>415	CDD:332684	23/78 (29%)
		SOX-TCF_HMG-box	561..632	CDD:238684	39/70 (56%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170582395
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.840