Protein Alignment Sox21a and sox3

DIOPT Version :9

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_001007502.1
• Gene: sox3 / 493228
• XenbaseID: XB-GENE-484815
• Length: 307
• Species: Xenopus tropicalis
• Alignment Length: 301
• Identity: 113/301 - (37%)
• Similarity: 144/301 - (47%)
• Gaps: 88/301 - (29%)

  Fly   101 NAPTSHSNSNTGSHHNS---HDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLL 162
            |||.....:..|..:.|   .:.:||||||||||||||||||||:|||||||||||||||:||||
 Frog    17 NAPNGGPGTPGGKGNASIPDQERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLL 81

  Fly   163 TEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKSPVPGGGGGGGGGGANGGVNAGGAGN 227
            ::.:|||||||||||||:||||:||||||||||.|||.|                         .
 Frog    82 SDSEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLK-------------------------K 121

  Fly   228 SGPSGPGSVGSPKDMQPQLSPLGQSL---------PHLHGHPH--------QSPYQSHPHHPHPH 275
            ...|.||::     :.|.:||:..|:         .|::|..:        |..|..||....|.
 Frog   122 DKYSLPGNL-----LAPGVSPVASSVGVGQRIDTYAHMNGWTNGAYSLMQDQLGYSQHPGMNSPQ 181

  Fly   276 PHHVQLAAATLSAKYGFGSPLELSLPRLPNAFPGLAHYPLDPTLALDLQARLQAMYAGSIYHPWR 340
            ...:|       .:|..|               ||.:.|:..:....:.|      |.|.|.
 Frog   182 MQQIQ-------HRYDMG---------------GLQYSPMMSSAQTYMNA------AASTYS--- 215

  Fly   341 YLPLISPETPPSPPSSSGTGISSYG-CVKSEKSSPNAVVAS 380
                :||..  :..||:...:.|.| .||||.|||...:.|
 Frog   216 ----MSPAY--NQQSSTVMSLGSMGSVVKSEPSSPPPAITS 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	SOX-TCF_HMG-box	120..191	CDD:238684	60/70 (86%)
sox3	NP_001007502.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..41		5/23 (22%)
		SOX-TCF_HMG-box	39..110	CDD:238684	60/70 (86%)
		SOXp	109..189	CDD:372055	25/116 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.010