Protein Alignment Sox21a and sox21b

DIOPT Version :9

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_001009888.1
• Gene: sox21b / 406246
• ZFINID: ZDB-GENE-040429-1
• Length: 245
• Species: Danio rerio
• Alignment Length: 247
• Identity: 114/247 - (46%)
• Similarity: 127/247 - (51%)
• Gaps: 63/247 - (25%)

  Fly   119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMK 183
            ||:||||||||||||.|||||||:||||||||||||||||||||||.:|||||||||||||:|||
Zfish     6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMK 70

  Fly   184 EHPDYKYRPRRKPKTLNKS-----PVPGGGG-------GGGGGGA-------NGGVNAGGAG--- 226
            ||||||||||||||||.|.     ||....|       ||...||       |....|..|.
Zfish    71 EHPDYKYRPRRKPKTLMKKDKFAFPVAYNLGEHEALKVGGLPAGALTESLMSNPDKAAAAAAAAA 135

  Fly   227 ---------NSGPSGPGSVGSP-KDMQP----QLSPLGQSL------------PHLHGHPHQSPY 265
                     ::.|.....:||. .::.|    ..||||...            .|.|.|.|.||
Zfish   136 ARVFFNPSMSANPYSFFDLGSKMTELSPPSFSYASPLGYPTAATAFSGAVGGGAHTHTHSHPSP- 199

  Fly   266 QSHPHHPHPHPHHVQLAAATLSAKYGFGSPLELSLPRLPNAFPGLAHYPLDP 317
             .:|.:..|..     .||..||  |...||...|      .||:....|:|
Zfish   200 -GNPGYMIPCN-----CAAWPSA--GLQPPLAYIL------LPGMGKPQLEP 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	SOX-TCF_HMG-box	120..191	CDD:238684	64/70 (91%)
sox21b	NP_001009888.1	SOX-TCF_HMG-box	7..78	CDD:238684	64/70 (91%)
		SOXp	77..>95	CDD:289133	11/17 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	1	1.000	-	-		otm25204
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R685
SonicParanoid	1	1.000	-	-		X1501
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	8	7.900