Protein Alignment Sox21a and sox4b

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_957195.2
• Gene: sox4b / 393875
• ZFINID: ZDB-GENE-040426-1274
• Length: 342
• Species: Danio rerio
• Alignment Length: 312
• Identity: 98/312 - (31%)
• Similarity: 130/312 - (41%)
• Gaps: 81/312 - (25%)

  Fly    97 NSHHNAPTSHSNSNTGSHHN------SHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRL 155
            ::|..:|:..|.::.|...|      :..|||||||||||||:.:|||:.:.:|.|||:||||||
Zfish    25 DAHAASPSPGSTASGGEKLNPGWCKTASGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRL 89

  Fly   156 GAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKSPVPGGGGGGGGGGANGGV 220
            |..||||.:|.|.|||.||:|||..||.::||||||||:|.|
Zfish    90 GKRWKLLKDGDKIPFIREAERLRLKHMADYPDYKYRPRKKVK----------------------- 131

  Fly   221 NAGGAGNSGPSGPGSVGSPKDMQPQLSPLGQSLPHLHGHPHQSPYQSHPHHPHPHPHH-VQLAAA 284
                :..|.||...|:..|           .|.....|.||:.       .|.|..|| :..|.|
Zfish   132 ----SSGSKPSEKLSISKP-----------SSKKRSAGKPHKK-------EPGPADHHSLYKAKA 174

  Fly   285 TLSAKYGFGSPLELSLPRLPNAFPGLAHYPLDPTLALDLQAR----------------LQAMYAG 333
            ....|........|.:....::.|..|..|..|||:....:.                ....|.|
Zfish   175 APVVKQSPEKKKRLYIFSSSSSSPSPAAVPASPTLSSSADSSDPLSLYEDASGSGKEDADTRYTG 239

  Fly   334 SIYHPWRYLPLISPETPPSPPSSSGTGISSYGCVKSEKSSPNAVVASAASPP 385
            |:..|       || ||.:..|||.:..||     |....|:.....|.:.|
Zfish   240 SMRAP-------SP-TPSAAHSSSSSQFSS-----SSDEEPDDDALDANTSP 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	52/78 (67%)
sox4b	NP_957195.2	None