DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21a and Sox15

DIOPT Version :9

Sequence 1:NP_001261827.1 Gene:Sox21a / 39567 FlyBaseID:FBgn0036411 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster


Alignment Length:546 Identity:136/546 - (24%)
Similarity:187/546 - (34%) Gaps:209/546 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLHRSHS------------------HSNGYTSSGSSN----------HSHSSSLSPQLPG----- 38
            |:|.|:|                  ||....|||..|          ||||.|..|.:..     
  Fly    51 LMHESNSDAGIYHVRQGSEHSSPSLHSPAIQSSGYENEHLNEAVLAAHSHSHSPMPMVSSAYVGG 115

  Fly    39 -------INLGLGMVGGLG------------MGMSVGVGSGSGN----TTPPPMPPA-------- 72
                   ||..:.::||.|            .||   ||.|:|.    |:..|:..|        
  Fly   116 GTASGSLINSNIPLLGGGGNSVLNKFLSHPHAGM---VGGGTGQMEDCTSHSPIEAASMWSYDYK 177

  Fly    73 -DLAVPPAA------PTPVAPKMHQHTHHHGNSHHNAPTSHSNSNTGSHHNSHDHIKRPMNAFMV 130
             ||..|...      |.|                  |...:....|.|.......|:||||||||
  Fly   178 GDLCAPNCGYLERHKPLP------------------ADLKYRPGGTQSKSAKESRIRRPMNAFMV 224

  Fly   131 WSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRK 195
            |::.:|:|:|.:||.:||:::||.||.:|:.||...:||:::||:|||.:||.|||:|||||||:
  Fly   225 WAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRR 289

  Fly   196 PKTLNKSPVPGGGGGGGGGGANGGVNAGGAGNSGPSGPGSVGSPKDMQPQLSPLGQSLP------ 254
            .::..::..|||             ......:..|...||..:||...|.|:....|..      
  Fly   290 KQSKLRAMQPGG-------------KEQSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDES 341

  Fly   255 ------HLHGHPHQSPYQSHPHHPHPHPHHV-------------QLAA----ATL--SAKYGFGS 294
                  ..||..........|..|...|..|             .|||    |.|  |:..|.|.
  Fly   342 TCNSTNQNHGQSTPGGLYEQPLKPTYSPSSVDCYSNADSTEQIESLAANCPPALLNESSPTGGGY 406

  Fly   295 PLELSLPRLPNAFPG-------------------------------LAHYPLDPTLALDLQARLQ 328
            ...|.|.:|....|.                               .|.|||.||....:.||  
  Fly   407 DNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQSQGQSQQGIYAATYPLAPTSVAVVAAR-- 469

  Fly   329 AMYA---------------GSIYHPWRYLPLISPETPPSPPSSSGTGISSYGCVKSEKSSPNAVV 378
            .||.               |:.|                ||.|    :|......|.::|.:|:.
  Fly   470 GMYVTCNNRGLLDHGHSVKGTFY----------------PPVS----VSEDDNSTSMRNSISALQ 514

  Fly   379 ASAASPPNIIXPTPLRFGAGTSSSAE 404
            ...    |::..||...| ||..::|
  Fly   515 QHC----NVVTSTPSSSG-GTMPTSE 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21aNP_001261827.1 SOX-TCF_HMG-box 120..191 CDD:238684 38/70 (54%)
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 38/70 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451318
Domainoid 1 1.000 49 1.000 Domainoid score I4418
eggNOG 1 0.900 - - E1_KOG0527
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10270
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R685
SonicParanoid 00.000 Not matched by this tool.
76.870

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