Sequence 1: | NP_001261827.1 | Gene: | Sox21a / 39567 | FlyBaseID: | FBgn0036411 | Length: | 407 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001019952.1 | Gene: | Sox18 / 311723 | RGDID: | 1311718 | Length: | 377 | Species: | Rattus norvegicus |
Alignment Length: | 351 | Identity: | 100/351 - (28%) |
---|---|---|---|
Similarity: | 147/351 - (41%) | Gaps: | 96/351 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 56 GVGSGSGNTTPPPMPPADLA-VPPAAPT--PVAPKMHQHTHHHGNSHHNAPTSHSNSNTGSHHNS 117
Fly 118 HDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHM 182
Fly 183 KEHPDYKYRPRRKP---KTLNKSPVPGGGGGGGGGGANGGVNAGGAGNSGPSGP-----GSVGSP 239
Fly 240 KDMQPQLSPL--GQSLPHLHGHPHQSPYQ-----SHPHHPHP------------HPHHVQLAAAT 285
Fly 286 LSAKYGFGSPLELSLPRLPNAFPGLAHYPLDPTLALDLQARLQAMYAGSIYHPWRYLPLISPETP 350
Fly 351 PSPPSSSGTGISSYGCVKSEKSSPNA 376 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sox21a | NP_001261827.1 | SOX-TCF_HMG-box | 120..191 | CDD:238684 | 38/70 (54%) |
Sox18 | NP_001019952.1 | SOX-TCF_HMG-box | 78..149 | CDD:238684 | 38/70 (54%) |
Sox17_18_mid | 191..239 | CDD:403331 | 10/52 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342359 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.840 |