DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21a and SOX8

DIOPT Version :9

Sequence 1:NP_001261827.1 Gene:Sox21a / 39567 FlyBaseID:FBgn0036411 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_055402.2 Gene:SOX8 / 30812 HGNCID:11203 Length:446 Species:Homo sapiens


Alignment Length:419 Identity:121/419 - (28%)
Similarity:165/419 - (39%) Gaps:110/419 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TSSGSSNHSHSSSLSPQLPGINLGLGMVGGLGMGMSVGVGSGSGNTTPPPMPPADLAVPPA---- 79
            |:|..|:...|.|.:|..|..:.|||..|       |.||...|:    |...||...|..    
Human    18 TASSMSHVEDSDSDAPPSPAGSEGLGRAG-------VAVGGARGD----PAEAADERFPACIRDA 71

  Fly    80 ------------APTPVAPKMHQHTHHHGNSHHNAPTSHSNSNTGSHHNSHDHIKRPMNAFMVWS 132
                        .|.||                       ....|....:..|:||||||||||:
Human    72 VSQVLKGYDWSLVPMPV-----------------------RGGGGGALKAKPHVKRPMNAFMVWA 113

  Fly   133 RGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPK 197
            :..|||:|...|.:||:|:||.||..|:||:|.:||||::||:|||..|.|:||||||:|||:  
Human   114 QAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRR-- 176

  Fly   198 TLNKSPVPGGGGGGGGG--GANGGVNAGGAGNSGPSGPGSVGSPKDMQPQLSPLGQSLPHLHGHP 260
               ||...|......|.  |.:.|   |||.....:|.|.                      || 
Human   177 ---KSAKAGHSDSDSGAELGPHPG---GGAVYKAEAGLGD----------------------GH- 212

  Fly   261 HQSPYQSHPHHP--HPHPHHVQLAAATLSAKYGFGSPLELSLPRLPNAFPGLAHYPLDPTLALDL 323
            |...:....|.|  .|.....:|..|        |:..||.|........|..:.........:|
Human   213 HHGDHTGQTHGPPTPPTTPKTELQQA--------GAKPELKLEGRRPVDSGRQNIDFSNVDISEL 269

  Fly   324 QARLQ-AMYAGSIYHPWRYLPLISPETPPSPPSSSGTGISSYGC--VKSEKSSPNAVVASAASP- 384
            .:.:. .|.|..::...:||||..| .||.|..:.|......|.  |.:.||:|:|    :||| 
Human   270 SSEVMGTMDAFDVHEFDQYLPLGGP-APPEPGQAYGGAYFHAGASPVWAHKSAPSA----SASPT 329

  Fly   385 ------PNIIX--PTPLRFGAGTSSSAEH 405
                  |:|.   |:|..:|.....|.::
Human   330 ETGPPRPHIKTEQPSPGHYGDQPRGSPDY 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21aNP_001261827.1 SOX-TCF_HMG-box 120..191 CDD:238684 43/70 (61%)
SOX8NP_055402.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 16/50 (32%)
Sox_N 18..89 CDD:315171 22/104 (21%)
Dimerization (DIM). /evidence=ECO:0000303|PubMed:31194875 58..100 7/64 (11%)
SOX-TCF_HMG-box 101..171 CDD:238684 42/69 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..259 39/142 (27%)
Transactivation domain (TAM). /evidence=ECO:0000303|PubMed:31194875 224..298 18/82 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..378 13/45 (29%)
Transactivation domain (TAC). /evidence=ECO:0000303|PubMed:31194875 335..446 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..446
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148478
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.740

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