DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21a and tcf7l1b

DIOPT Version :9

Sequence 1:NP_001261827.1 Gene:Sox21a / 39567 FlyBaseID:FBgn0036411 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_571371.2 Gene:tcf7l1b / 30556 ZFINID:ZDB-GENE-991110-10 Length:550 Species:Danio rerio


Alignment Length:505 Identity:100/505 - (19%)
Similarity:148/505 - (29%) Gaps:225/505 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SALLHRSHSHSNGYTSSGSS--NHSHSSSLSPQLPGINLGLGMVGGLGMGMSVGVGSGSGNTTPP 67
            ||.|..|.|.|.|:.|:...  .|:|...|:|.:.                       ..|..||
Zfish   143 SAALKDSQSPSPGHLSNKVPVVQHAHMHPLTPLIT-----------------------YSNEFPP 184

  Fly    68 PMPPADLA---------VP----PAAPTP------------------VAPKMHQHTH-------- 93
            ..|||.|:         :|    ||..:|                  :.|:..||.:        
Zfish   185 GTPPAHLSPEILDPKTGIPRTPHPAELSPYYPLSPGAVGQIPHPLGWLVPQQGQHMYPITAGGFR 249

  Fly    94 --------------------------HHGNSHHNAPTSH--------------------SNSNTG 112
                                      ||.:..|.....|                    :..:.|
Zfish   250 HPYPALAMNASMSSLVSSRFSPHLVPHHPHGLHQTGIPHPAIVSPVIKQEPNGELSPPVNTKSPG 314

  Fly   113 SHHNSHD---HIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEA 174
            .:....|   |||:|:||||::.:..|.|:..:.....::.|::.||..|..|:..::..:.:.|
Zfish   315 PNKKDEDKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQAKYYELA 379

  Fly   175 KRLRALHMKEHPDY----KYRPRRKPKTLNKSPVPGGGGGGGGGGANGGVNAGGAGNSGPSGPGS 235
            ::.|.||.:.:|.:    .|..|:|.|..||:.                                
Zfish   380 RKERQLHSQLYPGWSARDNYGKRKKRKRDNKTD-------------------------------- 412

  Fly   236 VGSPKDMQPQ-LSPLGQSLPH---------LHGHPHQSPYQSHPHHPHPHPHHVQLAAATLSAKY 290
             .:|:|...: ..|..|.||.         .||....||                   ||.||  
Zfish   413 -STPEDFSMRSKKPCVQYLPQEKMIDSPGSSHGSMLDSP-------------------ATPSA-- 455

  Fly   291 GFGSPLELSLPRLPNAFPGLAHYPLDPTLALDLQARLQAMYAGSIYHPWRYLPLISPETPPSPPS 355
            ...||          |.|...|......|:|..:             |.|: ||:|   .|.|.|
Zfish   456 ALASP----------AAPAATHSEQAQPLSLTTK-------------PERF-PLLS---KPPPSS 493

  Fly   356 SSGTGISSYGCVKSEKSSPNAVVASAASPPNIIXPTPLRFGAGTSSSAEH 405
            ||.:..||.|               ..:||.:. |.|  |...|..|..|
Zfish   494 SSSSSSSSSG---------------LPTPPLLSRPLP--FALLTPPSPFH 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21aNP_001261827.1 SOX-TCF_HMG-box 120..191 CDD:238684 20/74 (27%)
tcf7l1bNP_571371.2 CTNNB1_binding 1..231 CDD:285538 23/110 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..76
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..326 2/27 (7%)
SOX-TCF_HMG-box 325..396 CDD:238684 20/70 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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