Protein Alignment Sox21a and sox19a

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_570983.2
• Gene: sox19a / 30038
• ZFINID: ZDB-GENE-980526-102
• Length: 297
• Species: Danio rerio
• Alignment Length: 228
• Identity: 101/228 - (44%)
• Similarity: 124/228 - (54%)
• Gaps: 38/228 - (16%)

  Fly    75 AVPPAAPTPVAPKMHQH----THHHGNSHHNAPTSHSNSNTGSHHNSHDHIKRPMNAFMVWSRGQ 135
            ||||.         ||.    |..:|...|.:.....||......:..|.:||||||||||||||
Zfish    12 AVPPT---------HQSAQGMTQLNGGVTHGSAKPAVNSQQQQSSDPMDKVKRPMNAFMVWSRGQ 67

  Fly   136 RRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLN 200
            ||||||:|||||||||||||||||||||:.:||||||||||||||||||:|||||:||||.|.:.
Zfish    68 RRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDYKYKPRRKTKPVL 132

  Fly   201 KS-------PVPGG----GGGGGGGGANGGVNAGGAGNSGPSGPGSVGSPKDMQPQL-------- 246
            |.       |:..|    .....|.|.:..:::.|.|::| ..||..........||
Zfish   133 KKDNPAAKYPLSAGNLLAAAAAQGSGGSPRMDSYGWGHTG-GYPGMQTDALGYSQQLHRYDLSAL 196

  Fly   247 ---SPLGQSLPHLHGHPHQSP--YQSHPHHPHP 274
               |.:..:..:::|....:|  |.|.|..|.|
Zfish   197 QYPSAMATAQTYMNGANSYNPMSYSSTPQQPSP 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	69/78 (88%)
sox19a	NP_570983.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..52		11/48 (23%)
		HMG-box_SoxB	51..129	CDD:438790	69/77 (90%)
		SOXp	122..>187	CDD:463537	16/65 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	219..255		5/11 (45%)