Sequence 1: | NP_001261827.1 | Gene: | Sox21a / 39567 | FlyBaseID: | FBgn0036411 | Length: | 407 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062066.1 | Gene: | Sox10 / 29361 | RGDID: | 3735 | Length: | 466 | Species: | Rattus norvegicus |
Alignment Length: | 332 | Identity: | 104/332 - (31%) |
---|---|---|---|
Similarity: | 138/332 - (41%) | Gaps: | 107/332 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 117 SHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALH 181
Fly 182 MKEHPDYKYRPRRKPK---TLNKSPVPGGGGGGGGGGA-NGGVNAGGAGNSGP--SGPGSVGSPK 240
Fly 241 DMQPQLSPLGQSLPHLHGHP-----HQSPYQS----------------HPH------------H- 271
Fly 272 ------------------PHPHPHHVQLAAATLSAKYGFGSPLE--------LSLPRLPNAFPGL 310
Fly 311 AHYPLDPTLALDLQARLQAMYAGSIYHPWRYLPLISPETPP---SPPSSSGTGISS-----YGCV 367
Fly 368 KSEKSSP 374 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sox21a | NP_001261827.1 | SOX-TCF_HMG-box | 120..191 | CDD:238684 | 44/70 (63%) |
Sox10 | NP_062066.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..67 | ||
Sox_N | 12..93 | CDD:289229 | |||
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P56693 | 62..102 | 1/1 (100%) | |||
SOX-TCF_HMG-box | 103..173 | CDD:238684 | 43/69 (62%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 160..198 | 16/37 (43%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 213..275 | 16/71 (23%) | |||
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P56693 | 228..310 | 16/91 (18%) | |||
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P56693 | 353..466 | 13/59 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 355..375 | 5/32 (16%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 433..466 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342385 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.740 |