Protein Alignment Sox21a and Sox13

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: XP_063128147.1
• Gene: Sox13 / 289026
• RGDID: 1309674
• Length: 657
• Species: Rattus norvegicus
• Alignment Length: 214
• Identity: 73/214 - (34%)
• Similarity: 101/214 - (47%)
• Gaps: 38/214 - (17%)

  Fly     4 ISALLHRSHSHSNGYTSSGSSNHSHSS------SLSPQLPGINLGLGMVGGLGMGMSVG------ 56
            :|.|.:.|.|.|....|.|....||.:      |..|.||        :|.||.|.:|.
  Rat   337 VSELPNTSSSPSLKMNSCGPRPSSHGAPTRDLQSSPPNLP--------LGFLGEGDAVTKAIQDA 393

  Fly    57 ---VGSGSGNTTPPPMPPADLAVPPAAPTPVAPKMHQHTHHHGNSHHNAPTSHSNSN---TGSHH 115
               :.|.||.....|..|....:.....:|...::.::..|        |...:...   .||.|
  Rat   394 RQLLHSHSGALENSPSAPFRKDLISLDSSPAKERLEENCVH--------PLEEAMLGCDVDGSRH 450

  Fly   116 NSH----DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKR 176
            .|.    .||||||||||||::.:|||:.|..|.||||.|||.||:.||.:|..:|:|:.:|..|
  Rat   451 FSESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQAR 515

  Fly   177 LRALHMKEHPDYKYRPRRK 195
            |...|::::|||||:||.|
  Rat   516 LSRQHLEKYPDYKYKPRPK 534

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	43/77 (56%)
Sox13	XP_063128147.1	None