Protein Alignment Sox21a and Sox5

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: XP_006506994.1
• Gene: Sox5 / 20678
• MGIID: 98367
• Length: 792
• Species: Mus musculus
• Alignment Length: 198
• Identity: 69/198 - (34%)
• Similarity: 91/198 - (45%)
• Gaps: 25/198 - (12%)

  Fly    96 GNSHHNAPTSHSN--SNTGSHHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAE 158
            |:|..:|..|.|.  ..:....::..||||||||||||::.:|||:.|..|.||||.|||.||:.
Mouse   558 GDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSR 622

  Fly   159 WKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKSPVPGGGGGGG----------- 212
            ||.:|..:|:|:.:|..||...|::::|||||:||.|...|    |.|.....|
Mouse   623 WKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCL----VDGKKLRIGEYKAIMRNRRQ 683

  Fly   213 ------GGGANGGVNAGGAGNSGPSGPGSVGSPKDMQPQLSPLGQSLPHLHGHP-HQSPYQSHPH 270
                  ..|....:....||...||.....|.|....|.......|.|. .|.| .||.|.:...
Mouse   684 EMRQYFNVGQQAQIPIATAGVVYPSAIAMAGMPSPHLPSEHSSVSSSPE-PGMPVIQSTYGAKGE 747

  Fly   271 HPH 273
            .||
Mouse   748 EPH 750

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	43/78 (55%)
Sox5	XP_006506994.1	HMG-box_EGL13-like	583..660	CDD:438848	42/76 (55%)