Protein Alignment Sox21a and Sox13

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: XP_011246247.1
• Gene: Sox13 / 20668
• MGIID: 98361
• Length: 621
• Species: Mus musculus
• Alignment Length: 214
• Identity: 73/214 - (34%)
• Similarity: 99/214 - (46%)
• Gaps: 38/214 - (17%)

  Fly     4 ISALLHRSHSHSNGYTSSGSSNHSHSS------SLSPQLPGINLGLGMVGGLGMGMSVG------ 56
            :..|.:.|.|.|....|.|....||.:      |..|.||        :|.||.|.:|.
Mouse   301 VPELPNTSSSPSLKMNSCGPRPASHGAPTRDLQSSPPSLP--------LGFLGEGDAVTKAIQDA 357

  Fly    57 ---VGSGSGNTTPPPMPPADLAVPPAAPTPVAPKMHQHTHHHGNSHHNAPTSH---SNSNTGSHH 115
               :.|.||.....|..|....:.....:|...::.:...|        |...   |....||.|
Mouse   358 RQLLHSHSGALENSPNTPFRKDLISLDSSPAKERLEESCVH--------PLEEAMLSCDMDGSRH 414

  Fly   116 NSH----DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKR 176
            .|.    .||||||||||||::.:|||:.|..|.||||.|||.||:.||.:|..:|:|:.:|..|
Mouse   415 FSESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQAR 479

  Fly   177 LRALHMKEHPDYKYRPRRK 195
            |...|::::|||||:||.|
Mouse   480 LSRQHLEKYPDYKYKPRPK 498

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	43/77 (56%)
Sox13	XP_011246247.1	HMG-box_SoxD	423..499	CDD:438839	43/76 (57%)