DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21a and SOX30

DIOPT Version :9

Sequence 1:NP_001261827.1 Gene:Sox21a / 39567 FlyBaseID:FBgn0036411 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_848511.1 Gene:SOX30 / 11063 HGNCID:30635 Length:753 Species:Homo sapiens


Alignment Length:396 Identity:102/396 - (25%)
Similarity:149/396 - (37%) Gaps:99/396 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 NTTPP-------PMPPADLAVPPAAP-TPVAPKMHQHTHHHGNSHHN------APTSHSNSNTGS 113
            :|.||       ..||::|......| |||..||.............      .|:.....:|..
Human   265 HTVPPGARIQFQGAPPSELIRLTKVPLTPVPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPF 329

  Fly   114 HHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLR 178
            ..:.:.|:||||||||||:|..|..:|:.||..:|:|||.:||.||..|:|.||:|:.|||::::
Human   330 SKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIK 394

  Fly   179 ALHMKEHPDYKYRPRRKPKTLNKSPVPGGGGGGGGGGANGGVNAGGAGNSGPSGPG--------- 234
            ..|.:|.|.:.|:||  |....:.|:           :...|.:|...|...:.|.         
Human   395 EKHREEFPGWVYQPR--PGKRKRFPL-----------SVSNVFSGTTQNIISTNPTTVYPYRSPT 446

  Fly   235 -SVGSPKDMQPQLSPLGQSLPHLHGHPHQSPYQSHPHHPHPHPHHVQLAAATLSAKYGFGSPLEL 298
             ||..|....|...|:|::.|.:     |.|   .|....|.|..:...:.:.:|:.....|...
Human   447 YSVVIPSLQNPITHPVGETSPAI-----QLP---TPAVQSPSPVTLFQPSVSSAAQVAVQDPSLP 503

  Fly   299 SLPRL-PNAFPG------------LAHYPLDPT-LALDLQARL-------QAMYAGSIYHPWRYL 342
            ..|.| |..|.|            ..|....|| ::|:...|:       .|.:|.|...|.|..
Human   504 VYPALPPQRFTGPSQTDTHQLHSEATHTVKQPTPVSLESANRISSSASTAHARFATSTIQPPREY 568

  Fly   343 PLISPETPPSPPSSSGTGISSYGCVKSEKSSPNAVVASAASP---PNIIXPTPL-----RFGAGT 399
            ..:||                  |       |.:.....|||   |::..|.||     .||...
Human   569 SSVSP------------------C-------PRSAPIPQASPIPHPHVYQPPPLGHPATLFGTPP 608

  Fly   400 SSSAEH 405
            ..|..|
Human   609 RFSFHH 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21aNP_001261827.1 SOX-TCF_HMG-box 120..191 CDD:238684 35/70 (50%)
SOX30NP_848511.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 137..161
SOX-TCF_HMG-box 336..406 CDD:238684 35/69 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 514..575 14/85 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 726..753
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148488
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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