DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fbp1 and Lsp2

DIOPT Version :10

Sequence 1:NP_524065.1 Gene:Fbp1 / 39566 FlyBaseID:FBgn0000639 Length:1029 Species:Drosophila melanogaster
Sequence 2:NP_524816.1 Gene:Lsp2 / 45326 FlyBaseID:FBgn0002565 Length:701 Species:Drosophila melanogaster


Alignment Length:1093 Identity:191/1093 - (17%)
Similarity:348/1093 - (31%) Gaps:472/1093 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AFAAGVVAAGRITTNQDRVQGID-RMSLED-LQLQKFILDIVQNIRQPLQQSELINLDV------ 65
            :|....:||..:.....:.:.:| :::.:| |..|||:..|:|:|.|.         ||      
  Fly     3 SFTVIALAAVALLATLGQAKHLDSKVADKDFLMKQKFMYQILQHIYQD---------DVFTTPFG 58

  Fly    66 GLIADSQRYRGGID----KVMHNVIDLDRQRRLLDEHQVYSVGRLEHVQQLRGIYRLLARAQDFD 126
            |...:.:.:....|    :::.:..:|.:.:...|: .|:||...:|.:.:.|:.||...|::::
  Fly    59 GSYVEYKPWEHVADYVHPEMLEHFFELWQHQPFTDD-MVWSVMYDKHEEYVVGLVRLFYFAKNWE 122

  Fly   127 TLRRNVVYLRRNINPVLLVNALALAIRDREDTQALIVPAVQELLPELYLDEEVIQQVRSVLREQT 191
            |.:..|.:.|:::|..|.|.|:.:|...|:|.|.:::||..|:.|..|.|.:.::          
  Fly   123 TFQHVVYWARQHVNKQLFVYAVTIASLFRDDMQGVVLPAHYEIHPWSYFDSQALE---------- 177

  Fly   192 QRPSLMDIVGMRQRAMNPVMSILMPWREIHMQM----ALRKQQNIQNVLGQKRVVVRAENQGQVE 252
                                     |.| |.:|    .:::..||.|      ||:|. |...|.
  Fly   178 -------------------------WAE-HYKMHGFHHVKQMDNIYN------VVIRT-NYSNVH 209

  Fly   253 GTSLLTDDIELQNFVQNLIQELALLEDV----------------TQLEQSQLINNDQREEQWVGR 301
            |:  |..|.:|..:          ||||                |:..:..::|.|:|.|.::  
  Fly   210 GS--LNYDHDLAYY----------LEDVGFNAFYYYFNLDYPFWTKGGEEHVLNKDRRGELYL-- 260

  Fly   302 QRVQYQDNNQERDLGQDVDTGRLLRVSRRRLLEQQDEYQGQNIYGNQKDRFQRLLRRDDDNDDND 366
             .|.:|               .|.|....||.....|....|:|                     
  Fly   261 -YVHWQ---------------LLARWYLERLSHDLGEVPAFNMY--------------------- 288

  Fly   367 DDDDQDIRMGRVQLQRGISQGGLRIGGAHNLPTVSVNSDRLLHVSRRRLNAIQQDQQQDQLNGRQ 431
                                          :||.|..:..|                       :
  Fly   289 ------------------------------VPTESGYASNL-----------------------R 300

  Fly   432 RFMGLVRGDRLSEGRRVGQLDDVRQERQNNWQKQDYILTQGRTFGVQQERQNYADQLESVSRDDE 496
            .:.|:.:                       |.::::     .:|   ....||           |
  Fly   301 TYYGVPQ-----------------------WHRENH-----HSF---YHEHNY-----------E 323

  Fly   497 RLVHINRRRLNQDNQDIQQQQMHFPRRINSIGEGRRVMGERPIQDEDILKLIRGENRLKLMTDDE 561
            .:.|:                                                            
  Fly   324 HIEHV------------------------------------------------------------ 328

  Fly   562 ILEMLQRNRQQRLQKHQNDDDDDVNDDDVNVVHRQGLRSRRSLPNLRQQNNRLSEIVLHNLRQLV 626
              ||..:.....:.|::..|.:.:|                                        
  Fly   329 --EMYTQRVMDWIHKNEKFDVETIN---------------------------------------- 351

  Fly   627 ARLNQESIAQGQLIEEQQQLINNPRLTQSERYALRLNQIRINSQRSRQVLAQIGQIEQRIQEVIG 691
                                                                          |:|
  Fly   352 --------------------------------------------------------------VLG 354

  Fly   692 QVLNQVNVNSLRGQVIDQRQVESLIADVLLGRLGQVGIMTIIRQVVQD-NNIEQIDRTGLGI--- 752
            .:: |.|.:|     :|::         ..|.|.:     :.|.:|.: ::....|.:..|:   
  Fly   355 NII-QGNADS-----VDKK---------FYGSLDK-----LYRFIVNEGHHYGHGDESFPGLFMH 399

  Fly   753 ---RLSDPVVQYTLRRIV----RIVDEQREQILGGYRQEQLQMRGVSINDVRV-DKLRTRIEEHE 809
               .:.||:.....:.||    .:::...|     |.::.....||.|:.|.: :.|.|..|..:
  Fly   400 YDTSMRDPIFYEVYKTIVSHYWHLMETYPE-----YHKKDYAFEGVHIDAVHMPESLTTYFEHFD 459

  Fly   810 LDLSNL--VEQQVQGIQQE----------------IVGRQRRLNNKAFTIDMDITSDQDQDAIIR 856
            .|:||.  ||..|:|....                |..||:|||:|.|...:|:|||:.|||:::
  Fly   460 SDISNAVNVEPAVEGSADPLYTFGRNSHYKGSSYVIKARQQRLNHKPFEFTLDVTSDKAQDAVVK 524

  Fly   857 IFLGPAEDQQGRQGASLDERRRDFVLLDAIQVQLENGRNRIHRRSIDIPWTTSDVTPLVEIYRQV 921
            :|:||..|:.|.: ..|:...::|..|:..:|.||.|.|.|.|.|.|..:..:|.|..:|:|:::
  Fly   525 VFIGPKYDEHGHE-IPLEHNYQNFFELEHFKVHLEAGVNHIKRASGDFSFWVNDRTTYLELYQKL 588

  Fly   922 M------LQLKGQQAQQVVGIQQLVGENGRFPQHLLLPRGRPEGLPMQLLVVVSPLVELQVQDVV 980
            |      .:.|..|::...|:          |..::||||:..|...|...:|.|..:.:|....
  Fly   589 MDATNSDYKFKLDQSEAHCGV----------PNRMMLPRGKKGGQVFQFFYMVYPYHQPEVAQFT 643

  Fly   981 ---PAITIGIGSAS-LRDARPLGYPLDRPIHNEQELLQLTNVLLQDVVIIQEN 1029
               |.::.|:|..| ..||.|.|:|.:||:.::. ...:.|....||.|...:
  Fly   644 GYDPVVSCGVGHGSRYVDALPFGFPFNRPVKHDY-YFDVHNFKFVDVKIFHRD 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbp1NP_524065.1 Hemocyanin_N 38..159 CDD:461025 32/130 (25%)
Hemocyanin_C 781..1025 CDD:461026 79/272 (29%)
Lsp2NP_524816.1 Hemocyanin_N 33..156 CDD:461025 32/132 (24%)
Hemocyanin_M 161..420 CDD:459787 71/631 (11%)
Hemocyanin_C 429..692 CDD:461026 80/279 (29%)

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