DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbp1 and Lsp1gamma

DIOPT Version :9

Sequence 1:NP_524065.1 Gene:Fbp1 / 39566 FlyBaseID:FBgn0000639 Length:1029 Species:Drosophila melanogaster
Sequence 2:NP_523868.1 Gene:Lsp1gamma / 38015 FlyBaseID:FBgn0002564 Length:772 Species:Drosophila melanogaster


Alignment Length:1076 Identity:206/1076 - (19%)
Similarity:355/1076 - (32%) Gaps:381/1076 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNRIMLLVAFAAGVVAAGRITTNQDRVQGIDRMSLEDLQLQKFILDIVQNIRQPLQQSELINLDV 65
            |...::::|..|.|.|   .:....:|:..|:..||.   |||:.:||..|.:||...|.|.:..
  Fly     1 MKLTLVILALVACVTA---FSVPTQKVKIADKNFLEK---QKFLFEIVHRIDEPLMFEEWIKMGQ 59

  Fly    66 GLIADSQRYRGGIDKVMHNVIDLDRQRRLLDEHQVYSVGRLEHVQQLRGIYRLLARAQDFDTLRR 130
            .||.|..:|. ..|..|..:.:..:...||.:.:.:......|.:|..|::.....|:|::|..|
  Fly    60 KLITDKAQYE-TFDFYMEKLWESYKLGALLPKGEFFGALVKTHHKQAYGLFNFFYYAKDWETFVR 123

  Fly   131 NVVYLRRNINPVLLVNALALAIRDREDTQALIVPAVQELLPELYLDEEVIQQVRSVLREQTQRPS 195
            ||.:.|.::|..:.|.||.||:..:.:.:.||:|.:.|:.|:.:.:.:.:...            
  Fly   124 NVAWARIHVNEGMFVYALTLAVIHKPEFEGLILPQIYEIFPQYFFNSKFVYAA------------ 176

  Fly   196 LMDIVGMRQRAMNPVMSILMPWREIHMQMALRKQQNIQNVLGQKRVVVRAENQGQVEGTSLLTDD 260
                                                                             
  Fly   177 ----------------------------------------------------------------- 176

  Fly   261 IELQNFVQNLIQELALLEDVTQLEQSQLINNDQREEQWVGRQRVQYQDNNQERDLGQDVDTGRLL 325
               :.|...:..:|.:.|.                         :|:|                 
  Fly   177 ---EKFDYEVFSKLTMYEK-------------------------EYKD----------------- 196

  Fly   326 RVSRRRLLEQQDEYQGQNIYGNQKD----RFQRLLRRDDDNDDNDDDDDQDIRMGRVQLQRGISQ 386
                 .|.:...|:.| |.|...||    ::.:::..|.:....|          :..|:..:||
  Fly   197 -----ILYKDYSEFTG-NFYFYTKDWKTWQWYKMMGLDQEWYVED----------KYFLRENLSQ 245

  Fly   387 GGLRIGGAHNLPTVSVNSDRLLHVSRRRLNAIQQDQQQDQLNGRQRFMGLVRGDRLSEGRRVGQL 451
                          .||..:.:                |.:.|.::|...|...|        .:
  Fly   246 --------------FVNDPKYV----------------DVVKGLKKFYMPVDYTR--------DI 272

  Fly   452 DDVRQERQNNWQKQD-------YILT-------QGRTFGVQQERQNYADQLESVSRDDERLVHIN 502
            |....|.:..:..:|       |.|.       .|:.||:.::|                     
  Fly   273 DFFNDETKMTYFTEDLGWNAYWYYLNMDYAFFLNGKQFGLDKDR--------------------- 316

  Fly   503 RRRLNQDNQDIQQQQMHFPRRINSIGEGRRVMGERPIQDEDILKLIRGENRLKLMTDDEILEMLQ 567
                                                          ||                 
  Fly   317 ----------------------------------------------RG----------------- 318

  Fly   568 RNRQQRLQKHQNDDDDDVNDDDVNVVHRQGLRSRRSLPNLRQQNNRLSEIVLHNLRQLVARLNQE 632
                                                            |..::|::|::||..||
  Fly   319 ------------------------------------------------EYWIYNVQQILARYYQE 335

  Fly   633 SIAQ--GQLIE----EQQQLINNPRLT--QSERYALRLNQIRINSQRSRQVLAQIGQIEQRIQEV 689
            .:|.  |::.|    :|.:...:|:|.  ....|:.|.|.....:....::.:||.....|:.  
  Fly   336 RLANGFGEIPEFFWYKQIEYGYDPQLIYYNGIGYSYRKNYYDFYTYGKFEMYSQIQNFFSRVY-- 398

  Fly   690 IGQVLNQVNVNSLRGQVIDQRQVESLIADVLLGRLGQVGIMTIIRQV--------------VQDN 740
              :||......:..|||.|..:.|::   .::|...|....|..:..              |..|
  Fly   399 --KVLETGFYKTADGQVFDLHKPEAI---KIVGNYLQGNADTFDKYFFNYYYLLAHMYFADVDYN 458

  Fly   741 NIEQIDRTGLGIR--LSDPVVQYTLRRIVRIVDEQREQILGGYRQEQLQMRGVSINDVRVDKLRT 803
            ::|......|...  |.||.. ||..:....|....:..|..|.|:.|...|::|.||.|.||.|
  Fly   459 DMEVFPNVFLNFETMLRDPFF-YTFYKKFTDVFYTFKYYLKPYTQKDLFYEGITIKDVSVSKLVT 522

  Fly   804 RIEEHELDLSNLVEQQVQGI------QQEIVGRQRRLNNKAFTIDMDITSDQDQDAIIRIFLGPA 862
            ..:..:.|::||:..::..:      .:.::.||.|||:|.|..:..|.||:.|..::|:||||.
  Fly   523 YYDIVDFDVTNLLNDKMTFVDGQYIWDKALLARQARLNHKPFNFEFTIDSDKVQKGVVRVFLGPK 587

  Fly   863 EDQQGRQGASLDERRRDFVLLDAIQVQLENGRNRIHRRSIDIPWTTSDVTPLVEIYRQVMLQLKG 927
            .|:.||. ..||..|::||.:|:.......|.|.|.|.|.:..||..|.....|:|:.|||..:|
  Fly   588 FDEYGRV-IPLDYNRKNFVQIDSFVYPFIAGTNTIKRSSKEFSWTAEDRITYTELYKYVMLASEG 651

  Fly   928 QQAQQVVGIQQLVGENGRFPQHLLLPRGRPEGLPMQLLVVVSPLVEL--QVQDVVPAITIGIGSA 990
            :....:    .:...:..||..|:||:|..:|:|||....|||..|.  |..:.....:.|:||.
  Fly   652 KYDFPL----DISEPHNAFPDRLVLPKGWEQGMPMQFYFFVSPFAETYEQFSNFDYTYSSGVGSG 712

  Fly   991 S-LRDARPLGYPLDRPIHNEQELLQLTNVLLQDVVI 1025
            : ..|.:|.|||.||.| :|.:.. :.|...:||.:
  Fly   713 TRFVDTKPFGYPFDRQI-DESDFF-VPNGFFKDVKV 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbp1NP_524065.1 Hemocyanin_N 38..159 CDD:281684 34/120 (28%)
Hemocyanin_C 781..1025 CDD:281685 83/252 (33%)
Lsp1gammaNP_523868.1 Hemocyanin_N 31..153 CDD:397678 36/125 (29%)
Hemocyanin_M 159..490 CDD:395296 75/646 (12%)
Hemocyanin_C 499..747 CDD:397679 83/255 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470651
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28IXN
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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