DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fbp1 and Lsp1alpha

DIOPT Version :10

Sequence 1:NP_524065.1 Gene:Fbp1 / 39566 FlyBaseID:FBgn0000639 Length:1029 Species:Drosophila melanogaster
Sequence 2:NP_511138.2 Gene:Lsp1alpha / 32199 FlyBaseID:FBgn0002562 Length:816 Species:Drosophila melanogaster


Alignment Length:1068 Identity:218/1068 - (20%)
Similarity:367/1068 - (34%) Gaps:342/1068 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VAFAA--GVVAAGRITTNQDRVQGIDRMSLEDLQLQKFILDIVQNIRQPLQQSELINLDVGLIAD 70
            :||.|  .||.|    |...:...|.......|..|||:.:||..:..||...|.|.:......|
  Fly     5 IAFLACVAVVTA----TAYHKTHDIKVADKAFLMKQKFLFEIVYRVEDPLMFEEYIAMGKQFYFD 65

  Fly    71 SQRYRGGIDKVMHNVIDLDRQRRLLDEHQVYSVGRLEHVQQLRGIYRLLARAQDFDTLRRNVVYL 135
            .:.|. ..|..|....:..:...||.:.:.:......|.:|.||::.....|:|::|...||.:.
  Fly    66 KEHYT-HFDLYMEKFFEAHKAHALLPKGEFFGALVKHHAKQARGLFNFFYYAKDWETFMTNVAFA 129

  Fly   136 RRNINPVLLVNALALAIRDREDTQALIVPAVQELLPELYLDEEVIQQVRSVLREQTQRPSL---- 196
            |.:.|..:.|.||.||:..|:|...|::||:.|:.|:.:.:.:.:.:......|...:.||    
  Fly   130 RMHFNEGMFVYALTLAVIHRDDFHGLVLPAIHEIFPQFFFNSKFVMEAEKFDYEMWMKTSLYEKE 194

  Fly   197 -MDIVGMRQRAMNPVMSILMPWREIHMQMALRKQQNIQNVLGQKRVVVRAENQGQVEGTSLLTDD 260
             ||:                    .|........::     |.|:.:  |...|:..|.. .|.:
  Fly   195 YMDV--------------------YHKIPTFSSYEH-----GYKQGM--AYGYGKTHGHG-QTYE 231

  Fly   261 IELQNFVQNLIQELALLEDVTQLEQSQLINNDQREEQW---VGRQRVQYQDNNQERDLGQDVDTG 322
            .|..:..|.               ...:...|.:..||   :|.....|.::|.           
  Fly   232 HEFGSMYQT---------------SDYMYMKDFKTWQWWKLMGLGEHWYSESNY----------- 270

  Fly   323 RLLRVSRRRLLEQQDEYQGQNIYG-NQKDRFQRLLRRDDDNDDNDDDDDQDIRMGRVQLQRGISQ 386
             :||               :|||. ||:..:..:::              |::            
  Fly   271 -ILR---------------ENIYEYNQESNWLTMMK--------------DVK------------ 293

  Fly   387 GGLRIGGAHNLPTVSVNSDRLLHVSRRRLNAIQQDQQQDQLNGRQRFMGLVRGDRLSEGRRVGQL 451
                   ...:| |..:.|..|:....:|:...:|            :|                
  Fly   294 -------KFYMP-VDYSRDLYLYNEESKLSYFTED------------LG---------------- 322

  Fly   452 DDVRQERQNNWQKQDYILT-------QGRTFGVQQERQNYADQLESVSRDDERLVHINRRRLNQD 509
                      |....|.|.       .|:|||:                                
  Fly   323 ----------WNSYWYYLNMDYSFFLDGKTFGL-------------------------------- 345

  Fly   510 NQDIQQQQMHFPRRINSIGEGRRVMGERPIQDEDILKLIRGENRLKLMTDDEILEMLQRNRQQRL 574
                                                                             
  Fly   346 ----------------------------------------------------------------- 345

  Fly   575 QKHQNDDDDDVNDDDVNVVHRQGLRSRRSLPNLRQQNNRLSEIVLHNLRQLVARLNQESIAQGQL 639
                                               ||:|..|..|:|:.||::|.:.|.::.| |
  Fly   346 -----------------------------------QNDRRGEWWLYNVHQLLSRYHMERLSHG-L 374

  Fly   640 IE-------EQQQLINNPRLT--QSERYALRLNQIRINSQRSRQVLAQIGQIEQRIQEVIGQVLN 695
            .|       .|.::..:|:|.  ....|:.|.|...:.:..:.::|.:|...:||||.::.....
  Fly   375 GEIPQFSWFHQIEMGYDPQLIYYNGIGYSYRKNYYELETYGNFEMLDKITGFQQRIQNIVELGYY 439

  Fly   696 QVNVNSLRGQVIDQRQVES--LIADVLLGRLGQVGIM------TIIRQVVQDNNIEQID-----R 747
            |    :..|.:||.|:.||  :|.::|.|.:..:..:      .:......|.:..|::     .
  Fly   440 Q----TTDGHMIDLRKPESIEIIGNMLQGNVDAIDNIFFQFWYMLAHMYFADTHYYQMEVYPNVM 500

  Fly   748 TGLGIRLSDPVVQYTLRRIVRIVDEQREQILGGYRQEQLQMRGVSINDVRVDKLRTRIEEHELDL 812
            ......:.||:. |...:.:..|..|....|..|.:|||.|.||::..|.|.:|.|..:..:.|:
  Fly   501 LNFETMMRDPMF-YMFYKSIAQVYFQFMHHLPKYTKEQLLMPGVTLKHVEVSELVTYFDLVDFDV 564

  Fly   813 SNLVEQQV---QG---IQQEIVGRQRRLNNKAFTIDMDITSDQDQDAIIRIFLGPAEDQQGRQGA 871
            :|::..::   :|   ..:.:..||.|||:|.|:....|.|.:|:..:||.||||..|:.||. .
  Fly   565 TNMLNGKMVFHEGQFLWDKSLFARQMRLNHKPFSYTYTIDSARDEKVVIRAFLGPKFDEYGRM-I 628

  Fly   872 SLDERRRDFVLLDAIQVQLENGRNRIHRRSIDIPWTTSDVTPLVEIYRQVMLQLKGQQAQQVVGI 936
            ||.:.|.:|:.:|.....|:.|.|.|.|:|.|..||..|.|...|:|...|:...|:....:   
  Fly   629 SLTDNRMNFMEIDEFTYTLKTGSNLITRKSTDFAWTVKDRTTYTELYYYTMMAFDGKYDYPL--- 690

  Fly   937 QQLVGENGRFPQHLLLPRGRPEGLPMQLLVVVSPLVELQVQDVVP---AITIGIGSASLR-DARP 997
             .|...:..||..|:||.|..:|:|||:..:|.|.:..|.:....   ..:.||||.:.. |:.|
  Fly   691 -DLTEPHCGFPDRLVLPMGWKKGMPMQMFFMVVPYMAPQHEQFSTFDYTYSCGIGSGARHVDSLP 754

  Fly   998 LGYPLDRPIHNEQELLQLTNVLLQDVVI 1025
            .|||.||.| ||.| ..:.|:..:||.|
  Fly   755 FGYPFDREI-NEYE-FHVPNMYFKDVTI 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbp1NP_524065.1 Hemocyanin_N 38..159 CDD:461025 34/120 (28%)
Hemocyanin_C 781..1025 CDD:461026 85/253 (34%)
Lsp1alphaNP_511138.2 Hemocyanin_N 32..154 CDD:461025 34/122 (28%)
Hemocyanin_M 287..523 CDD:459787 55/445 (12%)
Hemocyanin_C 532..781 CDD:461026 86/256 (34%)

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