DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btl and Csf1r

DIOPT Version :9

Sequence 1:NP_001014583.1 Gene:btl / 39564 FlyBaseID:FBgn0285896 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001025072.1 Gene:Csf1r / 307403 RGDID:2425 Length:1022 Species:Rattus norvegicus


Alignment Length:1130 Identity:294/1130 - (26%)
Similarity:460/1130 - (40%) Gaps:319/1130 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 ITLQCVR--------PMAKWFYEDKFQLRATLLRLERAQSGNSGNYGCLDSQNRWYNISLVVGHK 107
            :||:||.        |::.::..|. :...::|..:.|...|:|.|.|.:.:             
  Rat    82 VTLRCVSNGSVEWDGPISPYWTLDS-ESPGSILITKNATFKNTGTYRCTELE------------- 132

  Fly   108 EPVGNDIASFVKLEDAPALPESDLFFQPLNESRSLKLLQPLPKTVQRTAGGLFQLNCSPMDPDAK 172
            :|:....|..:.::| |..| .:|..|.:......:.:.|                |...||..|
  Rat   133 DPMRGSTAIHLYVKD-PVRP-WNLLAQEVTVFEGQEAVLP----------------CLITDPTLK 179

  Fly   173 -GVNI--SW---LHNDT--QILGGRGRIKLKRWSLTVGQLQPEDAGSYHCELCVEQDCQRSNPTQ 229
             .|::  .|   :...|  ..|..||.|..|...|        |:.:|.|:..|......|...:
  Rat   180 DSVSLVREWGRPVSRKTVYSFLPWRGFIIHKAKFL--------DSHTYMCKAVVNARESTSIGIR 236

  Fly   230 LEVISRKHTVP---MLKPGYPRNTSIA--LGDNVSIECLLEDSALEPKITWLHKGNADNIDDLLQ 289
            |:| :|.|..|   :|:|     |.:.  .|:...|.|....|.:|..:             :|:
  Rat   237 LKV-NRAHPGPPHIILEP-----TKLVRIRGEAAQIVCSATHSEVEFNV-------------ILK 282

  Fly   290 RLREQSQLPVDVTRLITRMDEPQVLRLGNVLMEDGGWYICIAENQVG--------RTVAASYVDL 346
            |...:.::|::.........:...|.|..|..:|.|.|.|:|.|..|        :.|.::|::|
  Rat   283 RGDTKLEIPINSDFQDNAYKKVLTLNLNAVDFQDAGIYSCVANNAAGSNTATMNFQVVESAYLNL 347

  Fly   347 YSPSDTTTVRTTTTTTVASPIPTASTGEDNDDDVENPAAEASGGVGPPVFRKELKRLQHSLSGNT 411
                          |:..|.:...|.||:.|..|   .|:|..|         |:|...:..|  
  Rat   348 --------------TSEQSLLQEVSVGENLDLTV---IADAYPG---------LQRYNWTYLG-- 384

  Fly   412 VNLACPVYGKANITWTKDKKPLNRELGVYVQKNWT-------LRFVEATSEDSGLYNCKVCN--A 467
                 |.:          :.|.|.|.    :..||       |........::|.|:....|  .
  Rat   385 -----PFF----------EDPHNLEF----RTQWTTYSYSFKLHLNRVKPLEAGRYSLMAQNKAG 430

  Fly   468 WGCIQFDFSVQINDRTRSAPIIVVPQNQTVKVNGSLVMKCTVYSDLHPTVSWKRVVLKNASLDGL 532
            |..:.|:.::      |..|.:.|   ..:.||||.|:.|.|.....|.|:|..........|..
  Rat   431 WNNLTFELTL------RYPPEVSV---TWIPVNGSDVLLCDVSGYPQPNVTWMECRGHTDRCDEA 486

  Fly   533 KSVEIQNLNFTVTNDS------------VVL-------TLR-NVTFDQEGWYTCLASSGLGRSNS 577
            ::.:       |.:|:            |:|       ||: |:|      |.|.|.:.:|  ||
  Rat   487 QASQ-------VWDDTQPEVLSQKPFHRVILQSQLPIGTLKHNMT------YVCRAHNNVG--NS 536

  Fly   578 SVYLRVVS-----PLPPLEIYALLHAHPLGFTLAAITIVALFLLGSAFITFMLRRLRREKLLKLR 637
            |.:.|.:|     .||...::.     |:  .:|.|::::|.:|   .:..:|.:.:::...::|
  Rat   537 SQFFRAISLGQSKQLPDEYLFT-----PV--VVACISVMSLLVL---LLLLLLYKYKQKPKYQVR 591

  Fly   638 IETVHQWTKKVIIYRPGGEEGSGCSSGDLQMPVIRIEKQRTTVSTTGTGGTDPAQGFNEYEFPLD 702
            .:.:..:            ||:..:.                        .||.|      .|.:
  Rat   592 WKIIESY------------EGNNYTF------------------------IDPTQ------LPYN 614

  Fly   703 SNWEIPRQQLSLGSILGEGAFGRVVMAEAEGLPRSPQLAETIVAVKMVKE-EHTDTDMASLVREM 766
            ..||.||..|..|..||.||||:||.|.|.||.:...:.:  |||||:|. .|.| :..:|:.|:
  Rat   615 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK--VAVKMLKSTAHAD-EKEALMSEL 676

  Fly   767 EVMKMIGKHINIINLLGCCSQGGPLWVIVEYAPHGNLKDFLKQN---------RPGAPQR----- 817
            ::|..:|:|.||:||||.|:.|||:.||.||..:|:|.:||::.         .||....     
  Rat   677 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLSPGQDPEGDSSY 741

  Fly   818 ----------RSDS-------DGYLDDKPLIST--------QHLGEK--------ELTKFAFQIA 849
                      |.||       |.|::.:| :||        |.|.::        :|..|:.|:|
  Rat   742 KNIHLEKKYVRRDSGFSSQGVDTYVEMRP-VSTSSNDSFFKQDLDKEASRPLELWDLLHFSSQVA 805

  Fly   850 RGMEYLASRRCIHRDLAARNVLVSDGYVMKIADFGLARDIQDTEYYRKNTNGRLPIKWMAPESLQ 914
            :||.:|||:.|||||:||||||::.|:|.||.||||||||.:...|....|.|||:|||||||:.
  Rat   806 QGMAFLASKNCIHRDVAARNVLLTSGHVAKIGDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF 870

  Fly   915 EKKYDSQSDVWSYGVLLWEIMTYGDQPYPHILSAEELYSYLITGQRMEKPAKCSLNIYVVMRQCW 979
            :..|..||||||||:|||||.:.|..|||.||...:.|..:..|.:|.:|.....|||.:|:.||
  Rat   871 DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNNKFYKLVKDGYQMAQPVFAPENIYSIMQSCW 935

  Fly   980 HFESCARPTFAELVESFDGILQQAS----SNPNDAYLDLSMPMLETPPSSGDEDDGSDTETFRET 1040
            ..|...||||.::.    .:||:.:    ...:.|.|..|.....:...||....||.:|...|:
  Rat   936 DLEPTKRPTFQQIC----FLLQEQARLERREQDYANLPSSSSSSSSSSDSGGGSGGSSSEPEEES 996

  Fly  1041 S--------------PLRYQYTYKF 1051
            |              ||.....|:|
  Rat   997 SSEHLACCEPGDIAQPLLQPNNYQF 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btlNP_001014583.1 IG_like 149..232 CDD:214653 19/90 (21%)
IGc2 157..215 CDD:197706 15/65 (23%)
IG 247..336 CDD:214652 18/90 (20%)
Ig 258..340 CDD:143165 17/89 (19%)
I-set 394..479 CDD:254352 15/93 (16%)
IGc2 408..469 CDD:197706 11/69 (16%)
IG_like 492..583 CDD:214653 26/110 (24%)
Ig 507..583 CDD:299845 21/95 (22%)
PKc_like 700..1000 CDD:304357 141/347 (41%)
TyrKc 712..996 CDD:197581 136/331 (41%)
Csf1rNP_001025072.1 Ig 69..129 CDD:299845 11/47 (23%)
IG_like 72..145 CDD:214653 14/76 (18%)
IG_like 157..239 CDD:214653 21/105 (20%)
Ig 157..223 CDD:299845 18/89 (20%)
ig 251..337 CDD:278476 21/103 (20%)
IG_like 253..339 CDD:214653 20/103 (19%)
Ig 343..442 CDD:299845 27/151 (18%)
IG_like 355..439 CDD:214653 23/116 (20%)
Ig 458..541 CDD:143165 22/97 (23%)
PTKc_CSF-1R 585..957 CDD:133237 149/421 (35%)
Pkinase_Tyr 624..948 CDD:285015 136/327 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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