DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btl and ret

DIOPT Version :9

Sequence 1:NP_001014583.1 Gene:btl / 39564 FlyBaseID:FBgn0285896 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_858048.2 Gene:ret / 30512 ZFINID:ZDB-GENE-980526-307 Length:1106 Species:Danio rerio


Alignment Length:1212 Identity:290/1212 - (23%)
Similarity:452/1212 - (37%) Gaps:413/1212 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 NSGNYGCLDSQNRWYNISLVVGHKEPVGNDIASFVKLEDAPALPESDLFFQPLNESRSLKLLQPL 148
            :.|::|....| |.|..::.||.::  |:.:...:.:.:.|.  |...||.              
Zfish    17 SEGSFGLYFPQ-RLYTENIYVGQQQ--GSPLLQVISMREFPT--ERPYFFL-------------- 62

  Fly   149 PKTVQRTAGGLFQLNCSPMDPDAKGVNISWLHNDTQILGGRGRIKLKR---W----SLTVGQLQ- 205
                           ||..|     ...||.|.|.    ..|.:.|.:   |    ||..|.:: 
Zfish    63 ---------------CSHRD-----AFTSWFHIDE----ASGVLYLNKTLEWSDFSSLRSGSVRS 103

  Fly   206 PEDAG-----------SYHCEL--CVEQDCQRSNPT-----QLEV--------ISRKHTVPMLKP 244
            |:|..           ...|.:  .||......|.|     |:|:        ||..|.....:|
Zfish   104 PKDLTLKVGVSSTPPMKVMCTILPTVEVKLSFINDTAPSCGQVELSTLCFPEKISNPHITENREP 168

  Fly   245 GYPRN----TSIALGDNVSIECLLEDSALEPKITWLHKGNADNIDDLLQRLREQSQLPVDVTRLI 305
            |..|.    |.:::..|.:|...:...:..|..          :||        |...:.||..:
Zfish   169 GALRQLRRFTHMSICPNYTISYGVVAGSSVPFA----------VDD--------STSELVVTAQV 215

  Fly   306 TRMDEPQVLRLGNVLMEDGGWYICIAENQVGRTVAASYVDLYSPSDTTTVRTTTTTTVASPIPTA 370
            .| :|.:|..|..|.|       ...|..:.....:.:|::|...|.            ||..  
Zfish   216 DR-EEKEVYHLDIVCM-------VRTERNLEEVFRSLHVNIYDEDDN------------SPYV-- 258

  Fly   371 STGEDNDDDVENPAAEASGGVG-------------PPVFRKELKRLQHSLSGNTV--------NL 414
                 |..|.|:...|.....|             .||:  ...::|:.|.|..:        |.
Zfish   259 -----NGTDTEDVLVEFDRSEGTVFGTLFVYDRDTTPVY--PTNQVQNKLVGTLMTNDSWIKNNF 316

  Fly   415 AC--------PVYGKANITWTKDKKPLNRELGVYVQKNWTLRFVEATSEDSGLYNCKVCNAWGCI 471
            |.        .::|....|..:.|..|::.|.|..|:::.|.::                     
Zfish   317 AIEHKFREEKAIFGNVRGTVHEYKLKLSQNLSVTEQRSFLLGYL--------------------- 360

  Fly   472 QFDFSVQINDRTRSAP-----------IIVVP-QNQTVKVNGSLVMKCTVYSDLHPTVSWKRVVL 524
                   :||.|...|           ::.|| :...|..:.::..|.|.||.:      .:|.:
Zfish   361 -------VNDTTFPGPEGTVLLHFNVTVLPVPIRFSNVTYSFTVSQKATTYSQI------GKVCV 412

  Fly   525 KNA----SLDGLKSVEIQNLNFTV-----------------------TNDSVVL----------- 551
            :|.    .:|....:||.:.|.|.                       .||:.||           
Zfish   413 ENCQKFKGIDVTYQLEIVDRNITAEAQSCYWAVSLAQNPNDNTGVLYVNDTKVLRRPECQELEYV 477

  Fly   552 -------------TLRNVTFD--------------------QEGWYTCLASSGLGR--------- 574
                         |...|:|.                    |.|  .|.|:.|||.         
Zfish   478 VIAQEQQNKLQAKTQLTVSFQGEADSLKTDEPRFPACAEKRQRG--DCEATRGLGAPTGRCQWRQ 540

  Fly   575 -SNSSVYLRVVSPLPPL----------------------------------EIYALLHAHPLGF- 603
             .:..:..|..:..|.|                                  ::|.:...|...: 
Zfish   541 GRDKGISKRYSTCSPNLGTCPDGYCDAIESKNISICPQDCSSEAIIGGYERDLYGIKAGHGTCYC 605

  Fly   604 ----------------------TLAAITIVALFLLGSAFITFMLRRLRREKLLKLRIETVHQWTK 646
                                  |:.|..|:..|::.....::.:.|             .|:.|.
Zfish   606 FEGKCFCERDEPEDDICNDMCKTVIATGIILSFIVSVLLSSYFIHR-------------YHKTTP 657

  Fly   647 K-------VIIYRPGGEEGSGCSSGDLQMPVIRIEKQRTTVSTTGTGGTDPAQGFNEYEFPLDSN 704
            |       :...||........|:.:::...:...:.:..:.|              ::.|.|..
Zfish   658 KPPIASAEMTFRRPAQSYPISYSANNVRRASLDSMENQVAIDT--------------FKIPEDPK 708

  Fly   705 WEIPRQQLSLGSILGEGAFGRVVMAEAEGLPRSPQLAETIVAVKMVKEEHTDTDMASLVREMEVM 769
            ||.||:.|.||..||||.||:||.|.|..|  ..:...|.|||||:||..:.:::..|:.|..::
Zfish   709 WEFPRKNLVLGKTLGEGEFGKVVKATAFRL--KGKAGYTTVAVKMLKENASHSELRDLLSEFTLL 771

  Fly   770 KMIGKHINIINLLGCCSQGGPLWVIVEYAPHGNLKDFLKQNRPGAPQRRSD----SDGYLDDKPL 830
            |.: .|.::|.:.|.|||.|||::|||||.:|:|::||:::|...|....:    :..||::.  
Zfish   772 KQV-NHPHVIKMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGNDANRNSSYLENP-- 833

  Fly   831 ISTQHLGEKELTKFAFQIARGMEYLASRRCIHRDLAARNVLVSDGYVMKIADFGLARDIQDTEYY 895
             ..:.|...:|..||:||:|||:|||..:.:|||||||||||::|..|||:||||:||:.:.:.|
Zfish   834 -DERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY 897

  Fly   896 RKNTNGRLPIKWMAPESLQEKKYDSQSDVWSYGVLLWEIMTYGDQPYPHILSAEELYSYLITGQR 960
            .|.:.||:|:||||.|||.:..|.:||||||:|||||||:|.|..|||.| :.|.|::.|.||.|
Zfish   898 VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI-APERLFNLLKTGYR 961

  Fly   961 MEKPAKCSLNIYVVMRQCWHFESCARPTFAE--------LVESFDGILQQASSNPNDAYL----- 1012
            ||||..|:..:|.:|.:||..||..||||::        :|:|.| .|..|:|.|.||.|     
Zfish   962 MEKPENCTDEMYNLMLRCWKQESDKRPTFSDISKELEKMMVKSRD-YLDLAASTPADALLYDDSL 1025

  Fly  1013 --------DLS-MPMLETPPSSGDEDD--GSDTETFRETSPL 1043
                    |.| .|:..|.||:..|:.  |.....:.|.||:
Zfish  1026 SEEDTPLVDCSNAPLPRTLPSTWIENKLYGMSYPNWPEKSPV 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btlNP_001014583.1 IG_like 149..232 CDD:214653 21/108 (19%)
IGc2 157..215 CDD:197706 15/76 (20%)
IG 247..336 CDD:214652 17/92 (18%)
Ig 258..340 CDD:143165 14/81 (17%)
I-set 394..479 CDD:254352 15/100 (15%)
IGc2 408..469 CDD:197706 11/76 (14%)
IG_like 492..583 CDD:214653 27/172 (16%)
Ig 507..583 CDD:299845 24/156 (15%)
PKc_like 700..1000 CDD:304357 142/311 (46%)
TyrKc 712..996 CDD:197581 134/295 (45%)
retNP_858048.2 CA 186..256 CDD:214520 17/107 (16%)
PTKc_RET 715..1004 CDD:173631 134/295 (45%)
Pkinase_Tyr 716..997 CDD:285015 133/287 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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