DRSC/TRiP Functional Genomics Resources

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Protein Alignment btl and Pdgfrl

DIOPT Version :9

Sequence 1:NP_001014583.1 Gene:btl / 39564 FlyBaseID:FBgn0285896 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001011921.1 Gene:Pdgfrl / 290771 RGDID:1308028 Length:375 Species:Rattus norvegicus


Alignment Length:349 Identity:76/349 - (21%)
Similarity:129/349 - (36%) Gaps:109/349 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LLSDMDITLQCVRPMAKWFYE---DKFQ-LRATLLRLER--------AQSGNSGNYGCLDSQNRW 97
            |::...:.|:|.....:|.|.   |.|: .|.|:.:.||        :.:.::|.:.|      |
  Rat    86 LMAGQSVELRCKGSKVEWSYPAYLDTFKDSRLTVKQNERYGQLTLVNSTTADTGEFSC------W 144

  Fly    98 YNISLVVGHKEPVGNDIASFVKLEDAPALPESDLFFQPLNESRSLKLLQPLPKTVQRTAGGLFQL 162
                      |.:.|   .::...|......:.:||....|     |..|.|....     :..|
  Rat   145 ----------ERLCN---GYICRRDEARTGSTYIFFTEKGE-----LFVPSPSYFD-----VVYL 186

  Fly   163 N--------CSPMDPDAKGVNISWLH----------NDTQILGGRGRIKLKRWSLTVGQLQP--E 207
            |        |....|.||..    ||          |.|.|:     ..:||..:   .|||  :
  Rat   187 NPDRQAVVPCRVTAPSAKVT----LHREFPAKEIPANGTDIV-----YDMKRGFV---YLQPHSD 239

  Fly   208 DAGSYHCELCVEQDCQRSNPTQLEVISRKHTVPMLK-PGYPRNTSIAL-------GDNVSIEC-L 263
            ..|..:|:      .:....:|:.|   |:.:..:: |..|.:|:|..       ||::|:.| :
  Rat   240 HQGVVYCK------AEAGGKSQISV---KYQLLYVEVPSGPPSTTILASSNKVRGGDDISVLCTV 295

  Fly   264 LEDSALEPKITWLHKGNADNIDDLLQRLREQSQLPVDVTRLI-------TRMDEPQVLRLGNVLM 321
            |.:..:|.:..|:..|..|.....:|          |..|||       ||:.: .|:.:.:...
  Rat   296 LGEPDVEVEFRWIFPGQKDERPVTIQ----------DTWRLIHRGLGHTTRISQ-SVITVEDFET 349

  Fly   322 EDGGWYICIAENQVGRTVAASYVD 345
            .|.|:|||.|:|..|:|..|:.|:
  Rat   350 IDAGYYICTAQNLRGQTTVATTVE 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btlNP_001014583.1 IG_like 149..232 CDD:214653 20/102 (20%)
IGc2 157..215 CDD:197706 17/77 (22%)
IG 247..336 CDD:214652 27/103 (26%)
Ig 258..340 CDD:143165 24/89 (27%)
I-set 394..479 CDD:254352
IGc2 408..469 CDD:197706
IG_like 492..583 CDD:214653
Ig 507..583 CDD:299845
PKc_like 700..1000 CDD:304357
TyrKc 712..996 CDD:197581
PdgfrlNP_001011921.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..63
Ig 79..143 CDD:299845 12/56 (21%)
IG_like 83..>143 CDD:214653 12/56 (21%)
I-set 272..373 CDD:254352 29/111 (26%)
Ig 293..372 CDD:299845 24/89 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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