DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frl and AFH1

DIOPT Version :9

Sequence 1:NP_729954.2 Gene:Frl / 39561 FlyBaseID:FBgn0267795 Length:1183 Species:Drosophila melanogaster
Sequence 2:NP_189177.1 Gene:AFH1 / 822136 AraportID:AT3G25500 Length:1051 Species:Arabidopsis thaliana


Alignment Length:672 Identity:166/672 - (24%)
Similarity:270/672 - (40%) Gaps:133/672 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   482 SETKTSALERVQELEDQLEREIDRNSEFLYKYAELESESLTLKTEREQLAMIRQKLEEELTVMQR 546
            |.|.||...|..:..:...|....:|.....|...:.....|..   .::.:||.|:.:|.....
plant   381 SSTSTSPERRPNDTPEAYLRSPSHSSASTSPYRCFQKSPEVLPA---FMSNLRQGLQSQLLSSPS 442

  Fly   547 MLQHNEQELKKRDTLLHTKNMELQTLSRSLPRSASSGDGSLANGGLMAG----------STSGAA 601
            .....:..||:.|.|            ||  ||.||...|:.:....|.          |:..:.
plant   443 NSHGGQGFLKQLDAL------------RS--RSPSSSSSSVCSSPEKASHKSPVTSPKLSSRNSQ 493

  Fly   602 SLTLPPP---PPPMPASPTASSAAP-------PPPPPPAPPAP-----------------PP--- 636
            ||:..|.   ...:..||..|:.:|       ||||||.||.|                 ||   
plant   494 SLSSSPDRDFSHSLDVSPRISNISPQILQSRVPPPPPPPPPLPLWGRRSQVTTKADTISRPPSLT 558

  Fly   637 PPGFSPLGSPSGSLASTAPSPPHAPPMLSSFQPPPPPVAGFMPAPDGAMTIKRKVPTKYKLPTLN 701
            ||. .|...||.:|..|: ||...|..:.:.:     .|...|.|              ||..|:
plant   559 PPS-HPFVIPSENLPVTS-SPMETPETVCASE-----AAEETPKP--------------KLKALH 602

  Fly   702 WIALKPNQVRGTIFNELDDEKIFKQIDFNEFEERFKIGIGGALRNGSNGTEVDGSLQSSKRFKRP 766
            |..::.:..|..:::.|.... || :|....|..|   :..:|.|..|.:      |::.|...|
plant   603 WDKVRASSDREMVWDHLRSSS-FK-LDEEMIETLF---VAKSLNNKPNQS------QTTPRCVLP 656

  Fly   767 ----DNVSLLEHTRLRNIAISRRKLGMPIDDVIAAIHSLDLKKLSLENVELLQKMVPTDAEVKSY 827
                :| .:|:..:.:||||..|.|.:.|::|..|:...:...|..|.:|.|.||.||..|.:..
plant   657 SPNQEN-RVLDPKKAQNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKL 720

  Fly   828 KEYIIERKDQQL-LTEEDKFMLQLSRVERISSKLAIMNYMGNFVDSVHLISPQVQSIAGASTSLK 891
            |.|   ..|..: |...:||:..:..:.....::..|.|:.||...|..:....:::..|...|:
plant   721 KAY---NDDSPVKLGHAEKFLKAMLDIPFAFKRVDAMLYVANFESEVEYLKKSFETLEAACEELR 782

  Fly   892 QSRKFKAVLEIVLAFGNYLN-SNKRGPAYGFKLQSLDTLIDTKSTDKRSSLLHYIV-ATIRAKFP 954
            .||.|..:||.||..||.:| ...||.|:.|||.:|..|:|.|..|.:::|||::| ..|||:..
plant   783 NSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRAEGT 847

  Fly   955 EL--------------LNFE------SELYGTDKAASVALENVVADVQELEKGMDLVRKEAELRV 999
            .|              |..:      |||....|||::..|.:.:.|.:|.:|:..:.:..:::.
plant   848 RLSGNNTQTDDIKCRKLGLQVVSSLCSELSNVKKAAAMDSEVLSSYVSKLSQGIAKINEAIQVQS 912

  Fly  1000 KGAQ-------THILRDFLNNSEDKLKKIKSDLRHAQEAFKECVEYFGDSSRNADAAAF-FALIV 1056
            ...:       :..::.||..:|:::.::::....|....||..|||..:|...:|..| ..|:|
plant   913 TITEESNSQRFSESMKTFLKRAEEEIIRVQAQESVALSLVKEITEYFHGNSAKEEAHPFRIFLVV 977

  Fly  1057 R-----FTRAFKQHDQENEQRL 1073
            |     ..|..|:....||:.:
plant   978 RDFLGVVDRVCKEVGMINERTM 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FrlNP_729954.2 Drf_GBD 77..371 CDD:283920
Drf_FH3 374..567 CDD:283917 17/84 (20%)
FH2 687..1063 CDD:280362 106/415 (26%)
AFH1NP_189177.1 FH2 591..985 CDD:396655 107/422 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 116 1.000 Inparanoid score I2015
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.