DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frl and daam1b

DIOPT Version :9

Sequence 1:NP_729954.2 Gene:Frl / 39561 FlyBaseID:FBgn0267795 Length:1183 Species:Drosophila melanogaster
Sequence 2:NP_001025307.1 Gene:daam1b / 560060 ZFINID:ZDB-GENE-030131-4212 Length:1079 Species:Danio rerio


Alignment Length:1273 Identity:309/1273 - (24%)
Similarity:521/1273 - (40%) Gaps:349/1273 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RNGHQHNGSISSGTLQKQD-------LRYDIGCSSQYQHVRQPSLRSRSQQPMPTTDELDRRFAK 90
            |.|..|..|......|..|       ||.|....:.     :|:|      |:|:.||||..|::
Zfish     6 RGGGGHGASFFFCCFQSSDHPEITYRLREDFALQTM-----EPAL------PIPSYDELDAMFSE 59

  Fly    91 VLASMDLPPDKAKLLRNYDDEKKWDMICDQEMVQAKDP-----PSHYLSKLRTYLDPKASRSHRL 150
            ::..:||.....:.:.....||||.:.|.::..|.::.     |..|:.:|.:    .|:|...|
Zfish    60 LVDELDLTEKHREAMFALPAEKKWQIYCSKKKEQEENKGATSWPEFYIDQLNS----MAARKTLL 120

  Fly   151 YLFYFLCQKRKMVGESTSTQVLRDLEISLRTNHIEWVKEFLDDTNQGLDALVDYLSFRLQMMRHE 215
            .|     :|.:   |....:.:..|:.:|||..:.:|..|:|     ||.|...|:| |:.|.:|
Zfish   121 AL-----EKEE---EEERNKTIESLKTALRTQPMRFVTRFID-----LDGLTCILNF-LKSMDYE 171

  Fly   216 QRLQGVLCASEERLNLTNGGDGGEIVMGNSSSVSPGGGGGLLSHGNSTGHGLANGTLDSRQQHTM 280
                                                                   |.:|:     
Zfish   172 -------------------------------------------------------TTESQ----- 176

  Fly   281 SYGFLRPTIADALDSPSLKRRSRHIAKLNMGAATDDIHVSIM-CLRAIMNNKYGFNMVIQHREAI 344
                                                ||.|:: |::|:|||..|...|:.|.|:|
Zfish   177 ------------------------------------IHTSLIGCIKALMNNSQGRAHVLSHTESI 205

  Fly   345 NCIALSLIHKSLRTKALVLELLAAICLVKGGHEIILGSFDNFKDVCQEKRRFQTLM--------E 401
            |.||.||...:::||..|||::.|:|||.|||:.||.:..:::....|:.|||||:        .
Zfish   206 NIIAQSLATDNIKTKVAVLEIMGAVCLVPGGHKKILEAMLHYQKFACERTRFQTLLNDLDKSTGR 270

  Fly   402 YFMNFEAFNIDFMVACMQFMNIVVH---SVEDMNYRVHLQYEFTALGLDKYLERIRLTESEEL-- 461
            |     ...:....|.|.|:|.|:.   ....:.:||||:|||..||:...::::|..|:..|  
Zfish   271 Y-----RDEVSLKTAIMSFINAVLSQGAGESSLEFRVHLRYEFLMLGIQPIIDKLRSHENSTLDR 330

  Fly   462 ----------------------------------------------------------------- 461
                                                                             
Zfish   331 HLDYFEMLRNDDELTLSRRFEAIHIDTKSATQVFELVRKKLAHTDAYPHFMSVLHHCLLMPHKRS 395

  Fly   462 --KVQISAYLDNVFDVAALMEDS--ETKTSALE---------------RVQELEDQLEREIDRNS 507
              .||....||.:.....|..|.  :...:.||               .|::.::|.|:....:.
Zfish   396 GNTVQYWLLLDRIVQQMVLQNDKGHDPDATPLENFNVKNVVRMLVNENEVKQWKEQAEKMRKDHH 460

  Fly   508 EFLYKYAELESESLTLKTEREQLAMIRQKLEEELTVMQRMLQHN--EQELKKRDTLLHTKNMELQ 570
            |...|..:.|.|......|:|::.....|::|:|.  :.|.:|.  :|::.:..|.||    ||.
Zfish   461 ELQQKMEKKERECDAKTQEKEEMMQTLNKMKEKLE--REMGEHKLVKQQVAEMTTRLH----ELS 519

  Fly   571 TLSRSLPRSASSGDGSLANGGLMAGSTSGAASLTLPPPPPPMPASPTASSAAPPPPPPPA----P 631
            |      |..:|..|.....|.:.|.       .|||||||    |......|||||||.    |
Zfish   520 T------RQIASVPGGPPVSGPLGGP-------LLPPPPPP----PPGGMMPPPPPPPPCGAMMP 567

  Fly   632 PAPPPPPGFSPLGSPSGSLASTAPSPPHAPPMLSSFQPPPPPVAGFMPAPDGAMTIKRKVP-TKY 695
            |.|||||     |.|        |.||..||..|:   ||||     .||.|....|:.:| ...
Zfish   568 PPPPPPP-----GGP--------PPPPGRPPFGSA---PPPP-----GAPIGPSLKKKNIPQPSN 611

  Fly   696 KLPTLNWIALKPNQVRGTIFNELDDEKIFKQIDFNEFEERFKIGIGGALR--------NGSNGTE 752
            .|.:.||..|..|::.||::.::||.::||.:|..:.|:.|     .|.:        |.:...|
Zfish   612 PLKSFNWAKLSENKLEGTVWADVDDGRVFKILDLEDIEKTF-----SAYQRQQDFFMVNNNKQKE 671

  Fly   753 VDGSLQSSKRFKRPDNVSLLEHTRLRNIAISRRKLGMPIDDVIAAIHSLDLKK-LSLENVELLQK 816
            .:....|||:.|   .:|:::..|.:|..|...:|.:..:::..||.::|.:: |..:.:|.:.|
Zfish   672 TEDDTLSSKKVK---ELSVIDGRRAQNCNILLSRLKLSNEEIKRAILTMDEQEDLPKDMLEQMLK 733

  Fly   817 MVPTDAEVKSYKEYIIERKDQQLLTEEDKFMLQLSRVERISSKLAIMNYMGNFVDSVHLISPQVQ 881
            .||..::|...:|:   :.:...:.:.|:|:.::||:.....:|..:.:...|.:.:..|.|:|:
Zfish   734 FVPEKSDVDLLEEH---KHELDRMAKADRFLYEMSRINHYQQRLQSLYFKKKFAERIAEIKPKVE 795

  Fly   882 SIAGASTSLKQSRKFKAVLEIVLAFGNYLNSNKRGPAYGFKLQSLDTLIDTKST-DKRSSLLHYI 945
            ::..||..:..||.||.:||:|||||||:|..:||.|||||:.||:.:.||||: ||..:||||:
Zfish   796 ALTKASKEVLHSRNFKQLLEVVLAFGNYMNKGQRGNAYGFKISSLNKIADTKSSIDKNITLLHYL 860

  Fly   946 VATIRAKFPELLNFESELYGTDKAASVALENVVADVQELEKGMDLVRKEAELRVKGAQTH----- 1005
            :..:..|:.:::.|:.||....:||.|.:..:..::..|..|:..|..|.:.:.|..|.:     
Zfish   861 ITILEKKYSKVMLFQEELKNVPEAAKVNMTELEKEINNLRSGLKSVESELDFQKKRPQEYGDKFV 925

  Fly  1006 -ILRDFLNNSEDKLKKIKSDLRHAQEAFKECVEYFGDSSRNADAAAFFALIVRFTRAFKQHDQEN 1069
             ::..|:..:......::..|..|:|.|.:.|::||:.:.......||.:..:|.::|.:..|||
Zfish   926 SVVSQFITVASFSFSDVEDSLCEAKELFIKTVKHFGEDADKMQPDEFFGIFDQFLQSFAEARQEN 990

  Fly  1070 EQRLRLEKAAALAASKKENDQVLMRNKVNQKKQQLPSNGALSLQEAVINELKSKAHSVREKKLLQ 1134
            |...|          :||.::...|                  .||.:.|.:.|....|:.|...
Zfish   991 ENIRR----------RKEEEERRAR------------------MEAQLKEQREKERKARKAKENG 1027

  Fly  1135 QDEVYNGALEDILLGLKS-EPYRRADAVRRSQRRRIDN 1171
            :|:  .|..:|::..|:| |.:.:..:..:..|:||::
Zfish  1028 EDD--GGEFDDLVSALRSGEVFDKDLSKMKRNRKRINS 1063

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FrlNP_729954.2 Drf_GBD 77..371 CDD:283920 65/299 (22%)
Drf_FH3 374..567 CDD:283917 55/291 (19%)
FH2 687..1063 CDD:280362 106/392 (27%)
daam1bNP_001025307.1 Drf_GBD 45..232 CDD:283920 66/306 (22%)
Drf_FH3 235..439 CDD:283917 37/208 (18%)
FH2 603..983 CDD:280362 106/390 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54599
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000085
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3069
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.