DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frl and Fnbp4

DIOPT Version :9

Sequence 1:NP_729954.2 Gene:Frl / 39561 FlyBaseID:FBgn0267795 Length:1183 Species:Drosophila melanogaster
Sequence 2:NP_061298.2 Gene:Fnbp4 / 55935 MGIID:1860513 Length:1030 Species:Mus musculus


Alignment Length:579 Identity:102/579 - (17%)
Similarity:155/579 - (26%) Gaps:315/579 - (54%)


- Green bases have known domain annotations that are detailed below.


  Fly   474 DVAALMEDSETKTSALERVQELEDQLEREIDRNSEFLYKYAELESESLTLKTEREQLAMIRQK-- 536
            |...:.|.|:.:|...|..::::.||..:::...:..::..||.:   ||.::.|.|.:.||.  
Mouse   498 DSEKIDEISDKETEVEESSEKIKVQLAPKVEEEQDLKFQIGELAN---TLTSKFEFLGINRQSIS 559

  Fly   537 ------LEEELTV------------MQRMLQHNEQELKK---------------RDTLLH----- 563
                  |:.|..:            ::|.||...::||:               ||...:     
Mouse   560 NFHMLLLQTETRIADWREGALNGNYLKRKLQDAAEQLKQYEINATPKGWSCHWDRDHRRYFYVNE 624

  Fly   564 -------------------TKNMELQTLSR--------SLPRSASSGDGSLANGGLMAGSTSGAA 601
                               ||.:..::|.:        :.|.|..|.:.  ..|.|...|.||..
Mouse   625 QSGESQWEFPDGEEEEESQTKEVRDESLPKLTVKDKTCTDPNSTESSEN--PTGSLCKESFSGQV 687

  Fly   602 S-------------------------LTLPPPPPPMPASPTASSAAPPPPPPPAPPAP------- 634
            |                         |.:||||||.|.||      |||||||.||.|       
Mouse   688 SSSLMPLTPFWTLLQSNVPVLQPPLPLEMPPPPPPPPESP------PPPPPPPPPPPPLEDGEIQ 746

  Fly   635 -----------PPPPGFS----------------------------------------------- 641
                       ||.||..                                               
Mouse   747 EVEMEDEGSEEPPAPGTEEDTPLKPSTQTTAVTSQSLVDSTASSPPSNKAVKRKAPEMSTSVVQR 811

  Fly   642 ----------------------------------------------------------------- 641
                                                                             
Mouse   812 SATIGSSPVLYSQSAIAAGHQAVGMAHQAVGMAHQAVSASHAAAAGVGHQARGMSLQSNYLGLAA 876

  Fly   642 ------------PLG--SPS-------GSLASTA---PSPPHAPPMLSSFQPPPPPVAGFMPAP- 681
                        |:|  :||       |::|:.|   |.||..||...:  |||||.|..:|.| 
Mouse   877 APALMSYAECSVPIGVTTPSLQPAQARGTMAAPAVVEPPPPPPPPPTPT--PPPPPPAPKVPPPE 939

  Fly   682 -------DGAMTIKRKVPTKYKLPTLNWIALKPNQVRGTIFNELDDEKIFKQIDFNEFEERFKIG 739
                   |.|...|.|:|:..|    .|.:::         .|||:|                  
Mouse   940 KTRKGKKDKAKKSKTKMPSLVK----KWQSIQ---------RELDEE------------------ 973

  Fly   740 IGGALRNGSNGTEVDGSLQSSKRFKRPDNVSLLEHTRLRN-----------IAISRRKL 787
                  :.|:.:|.|....:.||.:......|:.....||           ..:.|||:
Mouse   974 ------DNSSSSEEDRESTAQKRIEEWKQQQLVSGLAERNANFEALPEDWRARLKRRKM 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FrlNP_729954.2 Drf_GBD 77..371 CDD:283920
Drf_FH3 374..567 CDD:283917 26/151 (17%)
FH2 687..1063 CDD:280362 20/112 (18%)
Fnbp4NP_061298.2 WW 222..249 CDD:334059
WW 605..636 CDD:238122 2/30 (7%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846925
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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