DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frl and shtn3

DIOPT Version :10

Sequence 1:NP_729954.2 Gene:Frl / 39561 FlyBaseID:FBgn0267795 Length:1183 Species:Drosophila melanogaster
Sequence 2:XP_073777939.1 Gene:shtn3 / 557118 ZFINID:ZDB-GENE-140106-61 Length:729 Species:Danio rerio


Alignment Length:669 Identity:139/669 - (20%)
Similarity:231/669 - (34%) Gaps:242/669 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 INCIALSLIHKSLRTKALVLELLAAI--CL----------------------VKGGHEIILGSFD 384
            :||....|.:.||.::..:.|||.:|  |:                      ||...|.:....:
Zfish   163 LNCENRKLKYLSLSSRPCLDELLPSISDCISLEEEVEQQDHSSDSFSQYKQQVKDLQETVSSLLE 227

  Fly   385 NFKDVC---QEKRR-------------------FQTLMEYFMNFEAFNIDFMVACMQFMNIVVHS 427
            ..|.:.   ||::|                   ::|:.:.....:.||...|||..::.|:    
Zfish   228 EKKQLACQLQEQQRQIKELTALREKEQAEMKELYKTIDQQSKTIKRFNRVSMVATTEYENM---- 288

  Fly   428 VEDMNYRVHLQ-------YEFTALGLDKYLERIRLTESEELKVQISAYLDNVFDVAALMEDSETK 485
            .|.::....|:       :|......:...:.:.|.:..:..:|:...|::|.:|        ||
Zfish   289 KEQLDLEQSLRQKAETYAHEMMVKQKEANRQSMILLQQADPSIQLLKALEDVANV--------TK 345

  Fly   486 TSALERVQELEDQLEREIDRNSEFLYKYAELESESLTLKTEREQLAMIRQ--KLEEELTVMQRML 548
            |...||:|..|                      :...|:||.||.|:.:|  :|:.:|.::....
Zfish   346 TLEEERMQHQE----------------------KVKALETELEQCALRKQLVQLQRQLEILDEEK 388

  Fly   549 QHNE---QELKKRDTLLHTKNMELQTLSRSLPRSASSGDGSLANGGLMAGSTSGAASLTLPPP-P 609
            :..|   ||.:|::|:|..|..:||       .:.:|.|           |.||.:..|.||| |
Zfish   389 KETEGRLQEEEKKNTILEEKVKDLQ-------EARTSSD-----------SASGPSPGTAPPPAP 435

  Fly   610 PPMPASPTASSAAPPPPPPPAPPAPPPPPG-FSPLGSPSGSLASTAPSPPHAPPMLSSFQPPPPP 673
            ||.|         |||||||.||.|||||. .:||.|....:..::......|.:..:      |
Zfish   436 PPQP---------PPPPPPPPPPPPPPPPSRCNPLSSLIAIMRKSSKGGKGTPKLEQA------P 485

  Fly   674 VAGFMPAPDGAMTIKRKVPTKYKLPTLNWIALKPNQVRGTIFNE-LDDEKIFKQIDFNEFEERFK 737
            |                                         || :||.|: |.:  ||..||.|
Zfish   486 V-----------------------------------------NEAVDDVKV-KAV--NEMMERIK 506

  Fly   738 IGIGGALRNGSNGTEVDGSLQSSKRFKRPDNVSLLEHTRLRNIAISRRKLGMPIDDVIAAIHSLD 802
            .|:                                   .||.:.....||..|:....||.....
Zfish   507 HGV-----------------------------------VLRPVKSQDTKLPSPVTAAAAAAVEEK 536

  Fly   803 LKKLSLENVELLQKMVPTD--------AEVK--SYKEYIIERKDQQLLTEEDKFMLQLSRVERIS 857
            .::.::|.::.:.:.|...        |.||  |..|.|:.|:.:|......:...|||:|.   
Zfish   537 HQESAMEELKGILETVKKSPSRGFQEVAHVKKDSELEVILRRRRKQACDTGAEDNGQLSKVS--- 598

  Fly   858 SKLAIMNYMGNFVDSVHLISPQVQSIAGASTSLKQSRKFKAVLEIVLAFGNYLNSNK-RGPAYGF 921
                    ..|.::..|.......:...:|:||..|.:           |:..:|:. |.||  .
Zfish   599 --------SSNSLNGRHSSDSGKDTEGPSSSSLSGSER-----------GSRTSSDSGREPA--V 642

  Fly   922 KLQSLDTLIDTKSTDKRSS 940
            ..||.|:.:::|...:..|
Zfish   643 VQQSSDSGMESKGAAQTDS 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FrlNP_729954.2 Drf_GBD 77..371 CDD:461886 9/28 (32%)
Drf_FH3 374..567 CDD:461885 43/226 (19%)
FH2 687..1063 CDD:396655 49/266 (18%)
shtn3XP_073777939.1 None

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