DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frl and fmnl2b

DIOPT Version :9

Sequence 1:NP_729954.2 Gene:Frl / 39561 FlyBaseID:FBgn0267795 Length:1183 Species:Drosophila melanogaster
Sequence 2:XP_005165914.1 Gene:fmnl2b / 492608 ZFINID:ZDB-GENE-041111-182 Length:1110 Species:Danio rerio


Alignment Length:1194 Identity:505/1194 - (42%)
Similarity:728/1194 - (60%) Gaps:179/1194 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 RSRSQQ----PMPTTDELDRRFAKVLASMDLPPDKAKLLRNYDDEKKWDMICDQEMVQAKDPPSH 131
            |:|..:    |||...||:.|||..|.:|:|||||.::||.||:||||::|||||..|.|:||..
Zfish    15 RARGSKPPKLPMPDPAELEERFAIALNTMNLPPDKVRILRQYDNEKKWELICDQERFQVKNPPHT 79

  Fly   132 YLSKLRTYLDPKASRSHRLYLFYFLCQKRKMVGESTSTQVLRDLEISLRTNHIEWVKEFLDDTNQ 196
            |:.|||::|||..:|.          :.|:.|.|  ||||||:||||||||||.||:|||::.|:
Zfish    80 YIQKLRSFLDPAVTRK----------KFRRRVQE--STQVLRELEISLRTNHIGWVREFLNEENK 132

  Fly   197 GLDALVDYLSFRLQMMRHEQRLQGVLCASEERLNLTNGGD-----GGEI------------VMGN 244
            |||.||:||||                   .:..:|..||     .|||            :.|:
Zfish   133 GLDVLVEYLSF-------------------AQYAVTFDGDVAESATGEISVETPWSRSIEDLHGD 178

  Fly   245 SSSVSPGGGGGLLSHGNSTGHGLANGTLDSRQQHTMSYGFLRPTIADALDSPSLKRRSRHIAKLN 309
            |:..||..|..:   ..||.|.|.:.||.||:                    :|| .||.:.|  
Zfish   179 SNLPSPVSGSSI---PRSTRHSLRSNTLPSRR--------------------TLK-NSRLVCK-- 217

  Fly   310 MGAATDDIHVSIMCLRAIMNNKYGFNMVIQHREAINCIALSLIHKSLRTKALVLELLAAICLVKG 374
                .||:||.|||||||||.:||||||:.|..|:|.|||||.:|:.||||||||||||:|||:|
Zfish   218 ----KDDVHVCIMCLRAIMNYQYGFNMVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLVRG 278

  Fly   375 GHEIILGSFDNFKDVCQEKRRFQTLMEYFMNFEAFNIDFMVACMQFMNIVVHSVEDMNYRVHLQY 439
            ||||||.:||:||:||.|.:||:.|||:|.| |..|||||||||||:|||||||||||:||||||
Zfish   279 GHEIILAAFDHFKEVCSETQRFEKLMEHFKN-EDNNIDFMVACMQFINIVVHSVEDMNFRVHLQY 342

  Fly   440 EFTALGLDKYLERIRLTESEELKVQISAYLDNVFDVAALMEDSETKTSALERVQELEDQL----E 500
            :||.|.||.||||::.|||::|||||.|||||:|||..|:||:|||.:|||||:|||:.|    :
Zfish   343 DFTKLSLDDYLERLKHTESDKLKVQIQAYLDNLFDVGTLLEDAETKNAALERVEELEENLSHMSD 407

  Fly   501 REIDRNSEFLYKYAELESESLTLKTEREQLAMIRQKLEEELTVMQRMLQHNEQELKKRDTLLHTK 565
            :.::..:|.:.|..|||.:.:....|.:.:..:.:....::..::|:::..::.::|:.| |..|
Zfish   408 KLLETENEAMSKIVELEKQLMQKNKELDTVRAVYRDASSQVHTLRRIVREKDETIQKQST-LEKK 471

  Fly   566 NMELQTLSRSLPRSASSGDG---------------------SLANGGLMAGSTSGAAS------- 602
            ..||:.......:....|||                     ::|..|..||::..:||       
Zfish   472 IHELERRGSLQIQVRGEGDGEGDVSPLPSPPQPMALSPCPDAMALAGACAGASYSSASSSQTGTL 536

  Fly   603 --LTLPPPPPPMPASPTASS-------AAPPPPPPPAPPAPPPPPGFSPLGSPSGSLASTAPSPP 658
              :..||||||.|...|.||       |.|||||||.||.|||||   |...|..|:..:||.| 
Zfish   537 RAMVTPPPPPPPPPPMTDSSVPNGPSAALPPPPPPPPPPPPPPPP---PPPPPGHSIEISAPLP- 597

  Fly   659 HAPPMLSSFQPPPPPVAGFMPA------------PDG-----AMTIKRKVPTKYKLPTLNWIALK 706
                      |||||.|..:|.            .||     ::.||:.:.||:::|..||:|||
Zfish   598 ----------PPPPPCAPPLPGSGTPTVIFNSGLTDGPIKLFSVKIKKPIKTKFRMPVFNWVALK 652

  Fly   707 PNQVRGTIFNELDDEKIFKQIDFNEFEERFKIGIGGALRNGSNGTEVDGSLQSSKR-FKRPDNVS 770
            |||:.||:|||:|||:|.:.::.:||||.||        ..:.|..||.:||..|. .|.|:.||
Zfish   653 PNQINGTVFNEIDDERILEDLNVDEFEEMFK--------TKAQGPAVDMTLQKQKAPQKGPNKVS 709

  Fly   771 LLEHTRLRNIAISRRKLGMPIDDVIAAIHSLDLKKLSLENVELLQKMVPTDAEVKSYKEYIIERK 835
            |||..|.:|:||:.||.|...:::..||.:.||:.:.::.||.|.:.:||::|||..::|..||:
Zfish   710 LLEANRAKNLAITLRKAGKSPEEICKAIQTFDLRTVPVDFVECLMRFMPTESEVKVLRQYERERR 774

  Fly   836 DQQLLTEEDKFMLQLSRVERISSKLAIMNYMGNFVDSVHLISPQVQSIAGASTSLKQSRKFKAVL 900
            ....||:||:||:..|::||:..::.||.:||||.||:.:::||:.:|..||.|:|.|:|.|.:|
Zfish   775 PMDGLTDEDRFMMLFSKIERLPQRMTIMAFMGNFTDSLQMLTPQLHAIIAASVSIKSSQKLKKIL 839

  Fly   901 EIVLAFGNYLNSNKRGPAYGFKLQSLDTLIDTKSTDKRSSLLHYIVATIRAKFPELLNFESELYG 965
            ||:||.|||:||:|||..|||||||||.|::|||||::.:|||||...::.|:|.:..|.:||:.
Zfish   840 EIILALGNYMNSSKRGAVYGFKLQSLDLLLETKSTDRKQTLLHYIANVVKEKYPIVSIFYNELHY 904

  Fly   966 TDKAASVALENVVADVQELEKGMDLVRKEAELRVKGAQTHILRDFLNNSEDKLKKIKSDLRHAQE 1030
            .:|||:|:||||:.||:||::||||.::|..:.   ....:|:||::::|.:|||:..|.:.||:
Zfish   905 IEKAAAVSLENVLLDVRELQRGMDLTKREYSMH---GHNSLLKDFIHHNEARLKKLLDDAKIAQD 966

  Fly  1031 AFKECVEYFGDSSRNADAAAFFALIVRFTRAFKQHDQENEQRLRLEKAAALAASKKENDQVLMRN 1095
            ||.|.|::||:|::....:.||.:.|||.::::|.|:|||.|.|.|:   |...|....:.:|. 
Zfish   967 AFDEAVKFFGESAKTMPPSVFFPVFVRFIKSYRQADEENELRKRQEQ---LMMEKLMEQEAMME- 1027

  Fly  1096 KVNQKKQQLPSNGALSLQEAVINELKSKAHSVREKKLLQQDEVYNGALEDILLGLKSEPYRRADA 1160
              .|:.||.||:.....|:.:|:||:.:  ..::.:|:.:.:  :||:|||:..|:::|:|||||
Zfish  1028 --EQESQQSPSHKGKRQQQELIHELRKR--QGKDSRLVYEGK--DGAIEDIITDLRNQPFRRADA 1086

  Fly  1161 VRRSQRRRIDNNRLS-RTLEEMDC 1183
            :|||.||.::...|. ||:|...|
Zfish  1087 LRRSGRRNLEVQHLQLRTVEISTC 1110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FrlNP_729954.2 Drf_GBD 77..371 CDD:283920 138/310 (45%)
Drf_FH3 374..567 CDD:283917 101/196 (52%)
FH2 687..1063 CDD:280362 167/376 (44%)
fmnl2bXP_005165914.1 Drf_GBD 24..275 CDD:283920 138/311 (44%)
Drf_FH3 278..475 CDD:283917 101/198 (51%)
FH2 633..999 CDD:280362 167/376 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 344 1.000 Domainoid score I1029
eggNOG 1 0.900 - - E1_KOG1923
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 856 1.000 Inparanoid score I413
OMA 1 1.010 - - QHG54599
OrthoDB 1 1.010 - - D149905at33208
OrthoFinder 1 1.000 - - FOG0000085
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103315
Panther 1 1.100 - - O PTHR45857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X513
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.840

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