DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frl and diaph3

DIOPT Version :10

Sequence 1:NP_729954.2 Gene:Frl / 39561 FlyBaseID:FBgn0267795 Length:1183 Species:Drosophila melanogaster
Sequence 2:NP_001003624.1 Gene:diaph3 / 445230 ZFINID:ZDB-GENE-040801-144 Length:267 Species:Danio rerio


Alignment Length:232 Identity:53/232 - (22%)
Similarity:96/232 - (41%) Gaps:65/232 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VKSRTITSAD--------VDADEQLQHPHSHAHHHSMRNGHQHNGSISSGTLQKQDLRYDIGCSS 60
            |.|:..:|.|        :|....::.|.|.....::.:..:|:   |||         |...||
Zfish    30 VSSQGGSSGDDGEKKPKFLDRFSSIRIPGSKKERPNLSHMSKHS---SSG---------DWSSSS 82

  Fly    61 QYQHVRQPSLRSRSQQPMPTTDELDRRFAKVLASMDLPPDKAKLLRNYDDEKKWDMICDQEMVQA 125
            :::.:   |.|..|::      |:...|.|::..|:|..:|...||..|...|.:|:....:..|
Zfish    83 EFEEL---SSRITSEK------EILALFEKMMEDMNLNEEKKAPLREKDLNTKREMVLQYIVTAA 138

  Fly   126 KD---------PPSHYLSKLRTYLDPKASRSHRLYLFYFLCQKRKMVGESTSTQVLRDLEISLRT 181
            |.         .|..:||:|::     .:...||    |.|              |..|.:||.:
Zfish   139 KTGSLRSSSQISPQEFLSELKS-----GATDERL----FAC--------------LDSLRVSLTS 180

  Fly   182 NHIEWVKEFLDDTNQGLDALVDYLSFRLQMMRHEQRL 218
            |.:.||:.|   .::||..|:|.|. :|.:.:|::::
Zfish   181 NPVSWVQSF---GHEGLGLLLDTLE-KLLLKKHQEKV 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FrlNP_729954.2 Drf_GBD 77..371 CDD:461886 36/151 (24%)
Drf_FH3 374..567 CDD:461885
FH2 687..1063 CDD:396655
diaph3NP_001003624.1 Drf_GBD 93..>233 CDD:461886 37/154 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.