DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frl and Diaph1

DIOPT Version :9

Sequence 1:NP_729954.2 Gene:Frl / 39561 FlyBaseID:FBgn0267795 Length:1183 Species:Drosophila melanogaster
Sequence 2:NP_001100863.3 Gene:Diaph1 / 307483 RGDID:1310707 Length:1266 Species:Rattus norvegicus


Alignment Length:1298 Identity:289/1298 - (22%)
Similarity:510/1298 - (39%) Gaps:368/1298 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 FAKVLASMDLPPDKAKLLRNYDDEKKWDMICDQEMVQAKDPPSHYLSKLRTYLDPK-ASRSHRLY 151
            |.::|..|:|..:|.:.||    ||  |::..:|||      |.||...:..::.| :|||..:|
  Rat    96 FEQMLVDMNLNEEKQQPLR----EK--DIVIKREMV------SQYLHTSKAGMNQKESSRSAMMY 148

  Fly   152 LFYFLCQKRKMVGESTSTQVLRDLEISLRTNHIEWVKEFLDDTNQGLDALVDYLSFRLQMMRHEQ 216
                :.:.|..:.:......|..|.:||..|.:.||:.|   ..:||.:|:|.|. ||    |::
  Rat   149 ----IQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTF---GAEGLASLLDILK-RL----HDE 201

  Fly   217 RLQGVLCASEERLNLTNGGDGGEIVMGNSSSVSPGGGGGLLSHGNSTGHGLANGTLDSRQQHTMS 281
            :        ||                                        .:|..|||.||.: 
  Rat   202 K--------EE----------------------------------------TSGNYDSRNQHEI- 217

  Fly   282 YGFLRPTIADALDSPSLKRRSRHIAKLNMGAATDDIHVSIMCLRAIMNNKYGFNMVIQHREAINC 346
                                                   |.||:|.||||:|...:::..|.|..
  Rat   218 ---------------------------------------IRCLKAFMNNKFGIKTMLETEEGILL 243

  Fly   347 IALSLIHKSLRTKALVLELLAAICLV---KGGHEIILGSFDNFKDVCQEKRRFQTLMEYFMNFEA 408
            :..::............:||:|:|::   :..:|.:|.:.....:: :|..|||.|::...:  .
  Rat   244 LVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEM-EEVERFQPLLDGLKS--G 305

  Fly   409 FNIDFMVACMQFMNIVVHSVEDMNYRVHLQYEFTALGLDKYLERIRLTESEELKVQISAYLDNVF 473
            .:|...|.|:|.:|.::...|::::|||::.|...|||.:.|:.:|..::::::||:     |||
  Rat   306 TSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIDNDDMRVQL-----NVF 365

  Fly   474 D------------------------------VAALMEDSETKTSALERVQ---------ELEDQL 499
            |                              :...::||:.:...|..:|         |...|.
  Rat   366 DEQGDEDFFDLKGRLDDIRMEMDDFGEVFQIILNTVKDSKAEPHFLSILQHLLLVRNDYEARPQY 430

  Fly   500 EREIDR------------NSEFLYKYAELESESLT------LKTEREQ--LAMIRQKLEEELTV- 543
            .:.|:.            :.:|..::.:::.|.|.      .|.|:.:  ...:.:||:.|||. 
  Rat   431 YKLIEECVSQIVLHKNGTDPDFKCRHLQIDIEGLVDQMIDKTKVEKSEAKATELEKKLDSELTAR 495

  Fly   544 ------MQRMLQHNEQELK----KRDTLLHTKNMELQTLSRSLPRSASSGDGSLA---------- 588
                  |::|....||:|:    ::|. |.::..::.|..:.|....|...|.:|          
  Rat   496 HELQVEMKKMENDFEQKLQDLQGEKDA-LDSEKQQITTQKQDLEAEVSKLTGEVAKLSKELEDAK 559

  Fly   589 ------NGGLMAGSTSGAASLTLPPP---------PPPMPASPTASSAAPPPPPPPAP-----PA 633
                  :...:|.|.|.:|::...||         |||.|..|....|.|||||||.|     |.
  Rat   560 KEMASLSAVAVAPSVSSSAAVPQAPPLPGDSGTVIPPPPPPPPLPGGAVPPPPPPPLPAGTGIPP 624

  Fly   634 PPPPPGFSPLGSPSGSLASTA-------------------------PSPPHAP-----------P 662
            |||.||.:.:.|......|||                         |.||..|           |
  Rat   625 PPPLPGGACISSSPQLFGSTAIPPPPPLPGATAIPPPPPLPGATAIPPPPPLPGATAIPPPPPLP 689

  Fly   663 MLSSFQPPPPPVAGF---------------------------MPAPDGAMTIKRKVPTKYKLPTL 700
            ..:...|||||:.|.                           :|.|...|.:....|..:.:|..
  Rat   690 GATGVPPPPPPLPGSVGVPPPPPLPGGPGLPPPPPPFPGAPGIPPPPPGMGVPPPPPFGFGIPAA 754

  Fly   701 NWI--ALKPNQV------------RGTIFNELDDEKIFKQIDFNEFE--ERF-KIGIGGALRNGS 748
            ..:  .|.|.:|            ...:..:|..:..:.::..:.||  |.| |:.:..:.:..:
  Rat   755 PVLPFGLTPKKVYKPEVQLRRPNWSKFVAEDLSQDCFWTKVKEDRFENNELFAKLTLAFSAQTKT 819

  Fly   749 NGTEVD---GSLQSSKRFKRPDNVSLLEHTRLRNIAISRRKLGMP---IDDVIAAIHSLDLKKLS 807
            :..:.|   |..:.|.:.|:...:.:|:....:|::|......||   |.:||..::...|.:..
  Rat   820 SKAKKDQEGGEEKKSVQKKKVKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESM 884

  Fly   808 LENVELLQKMVPTDAEVKSYKEYIIERKDQQLLTEEDKFMLQLSRVERISSKLAIMNYMGNFVDS 872
            ::|   |.|.:|...::|...|...|..|   |.|.::|.:.:..|.|:..:|..:.:...|.:.
  Rat   885 IQN---LIKQMPEPEQLKMLSELKEEYDD---LAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQ 943

  Fly   873 VHLISPQVQSIAGASTSLKQSRKFKAVLEIVLAFGNYLNSNKRGP-AYGFKLQSLDTLIDTKSTD 936
            |..|.|::.|:..|...|::|..|.::||:.|..|||:|:..|.. |:||.:..|..|.||||.|
  Rat   944 VENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSAD 1008

  Fly   937 KRSSLLHYIVATIRAKFPELLNFESELYGTDKAASVALENVVADVQELEKGMDLVRKEAELRVKG 1001
            ::.:|||::........|::|.|..||...:||:.|:.||       |:|.:|.::|:.      
  Rat  1009 QKMTLLHFLAELCETDHPDVLKFPDELAHVEKASRVSAEN-------LQKNLDQMKKQI------ 1060

  Fly  1002 AQTHILRDFLN-----NSEDK-LKKIKSDLRHAQE--------------AFKECVEYFGDSSRNA 1046
              ..:.||..|     :.:|| ::|:.|.::.|||              .:||..:||....:..
  Rat  1061 --ADVERDVQNFPAATDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKL 1123

  Fly  1047 DAAAFFALIVRFTRAFKQHDQENEQRLRLE---KAAALAASKKENDQVLMRNKVNQKKQQLPSNG 1108
            ....||..:..|...|.|..:||::|...|   :.|.||..|.|.:    |.:..||::||....
  Rat  1124 SVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKE----RLEKQQKREQLIDMN 1184

  Fly  1109 A----LSLQEAVINELKSKAHSVREKKLLQQDEVYNGALEDILLGLKSEPYRRADAVRRSQRR 1167
            |    ..:.::::..|:|.|...|::...|.:.....|:..:|    :....:.|||..|..:
  Rat  1185 AEGDETGVMDSLLEALQSGAAFRRKRGPRQVNRKAGCAVTSLL----ASELTKDDAVAASSAK 1243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FrlNP_729954.2 Drf_GBD 77..371 CDD:283920 60/283 (21%)
Drf_FH3 374..567 CDD:283917 52/262 (20%)
FH2 687..1063 CDD:280362 99/419 (24%)
Diaph1NP_001100863.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..83
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..531 6/28 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350422
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000085
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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