DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frl and Fmn1

DIOPT Version :10

Sequence 1:NP_729954.2 Gene:Frl / 39561 FlyBaseID:FBgn0267795 Length:1183 Species:Drosophila melanogaster
Sequence 2:XP_038962394.1 Gene:Fmn1 / 296512 RGDID:1306349 Length:1429 Species:Rattus norvegicus


Alignment Length:794 Identity:188/794 - (23%)
Similarity:324/794 - (40%) Gaps:172/794 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 LTESEELKVQISAYLDNVFDVAALMEDSET-----------KTSALE-----RVQELEDQ----- 498
            |.|.:|...:...|||...|.:...:|..|           ||...|     :..|.|.|     
  Rat   667 LHEDKEKTSRSELYLDLNPDQSPTEQDDRTPGRLQAVWPPPKTKDTEEKVGLKYTEAEYQAAILH 731

  Fly   499 LEREIDRNSEFLYKYAELESESLTLKTEREQLAMIRQKLEEELTVMQRMLQHNEQELKK-RDTLL 562
            |:||.....|.|....||::..:     |.:.|::..:|||.:..:::.|:....|.:: ||..:
  Rat   732 LKREHKEEIENLQAQFELKTFHI-----RGEHALVTARLEETIDNLKQQLEKRRGECEEMRDVCV 791

  Fly   563 HT---------KNMELQT-------------------------LSRSLPRSASSGDGSLANGGLM 593
            .|         :|:.:||                         |:.||.:.:.|.|....:..|.
  Rat   792 STDDDCFPKAFRNVCIQTDRETFLKPCDVESKTTRSSQIVPKKLTISLTQLSPSKDSKDFHAPLQ 856

  Fly   594 AGSTSGAASL--------TLPPPPPPMPASP------------------TASSAAPPPPPPPAPP 632
            ......::|.        ..||||||:|..|                  :|.|..|||||||.||
  Rat   857 TRECIPSSSQQKISPPAPPTPPPPPPIPPPPPLPPGLGPLPPAPPISPVSAGSPLPPPPPPPPPP 921

  Fly   633 -----APPPPPGFSPLGSPSGSLASTAPSPPHAPPMLSSFQPPPPPVAGFMPAPDGAMTIKRKVP 692
                 .|||||...||.:......|..|.||..||......|||||...|     |..:...:.|
  Rat   922 LPPSAGPPPPPPPPPLPNVQTPPNSGGPPPPPPPPPPPGLAPPPPPGLSF-----GLSSSSSQCP 981

  Fly   693 TK------YKLPTLNWIAL----KPNQVRGTIFNELDDEKIFKQIDFNEFEERFKIGIGGALRNG 747
            .|      ..:..|.|..:    |......|:::.|::..|   :|.:|||..|           
  Rat   982 RKPAIEPSCPMKPLYWTRIQINDKSQDATPTLWDSLEEPHI---MDTSEFEYLF----------- 1032

  Fly   748 SNGTEVDGSLQSSKRFKRPDNV----SLLEHTRLRNIAISRRKLGMPIDDVIAAIHSLDLKKLSL 808
            |..|........|:.:::.:.|    .||:..|.:.:.|....|.:.:.|:..||.::|...:.|
  Rat  1033 SKDTTQQKKKPLSEAYEKKNKVKKIIKLLDGKRSQTVGILISSLHLEMKDIQQAIFNVDDSVVDL 1097

  Fly   809 ENVELLQKMVPTDAEVKSYKEY--IIERKDQQLLTEEDKFMLQLSRVERISSKLAIMNYMGNFVD 871
            |.:..|.:....:.|:...::|  ....:|.:||.:.::|:.:|:::...:.:...:.:...|.:
  Rat  1098 ETLAALYENRAQEDELTKIRKYYETSREEDLKLLDKPEQFLHELAQIPNFAERAQCIIFRAVFSE 1162

  Fly   872 SVHLISPQVQSIAGASTSLKQSRKFKAVLEIVLAFGNYLN--SNKRGPAYGFKLQSLDTLIDTKS 934
            .:..:..:|:.:..||..|...:..|.:|.::||||||:|  :..||.|.|:.|:.|..|.|.||
  Rat  1163 GITSLHRKVEIVTRASKGLLHMKSVKDILALILAFGNYMNGGNRTRGQADGYSLEILPKLKDVKS 1227

  Fly   935 TDKRSSLLHYIVATIRAKFPELLNFESELYGTDK-------------AASVALENVVADVQELEK 986
            .|...:|:.|:|     |:  .|.:..:..||||             |:.|..|:::.|:::|::
  Rat  1228 RDNGMNLVDYVV-----KY--YLRYYDQEAGTDKSVFPLPEPQDFFLASQVKFEDLIKDLRKLKR 1285

  Fly   987 GMDLVRKEAELRVKGAQTHILRDFLNNSEDKLKKIK-------SDLRHAQEAFKECVEYFG---- 1040
            .::...::..|..|.:....|:.|.:..|:..||.|       |.|.:||::|:..|.|||    
  Rat  1286 QLEASEQQMRLVCKESPREYLQPFKDKLEEFFKKAKKEHKMEESHLENAQKSFETTVGYFGMKPK 1350

  Fly  1041 DSSRNADAAAFFALIVRFTRAFK---QHDQENEQRLRLEKAAALAA---------SKKENDQVLM 1093
            ...:....:..|.:...|...||   :.:.:|..:.||:.|.|..:         :||.|....:
  Rat  1351 TGEKEVTPSYVFMVWFEFCSDFKTIWKRESKNISKERLKMAEASVSKLTSEKKVETKKINPTASL 1415

  Fly  1094 RNKVNQKKQQLPSN 1107
            :.::.||:..:.:|
  Rat  1416 KERLRQKEASVATN 1429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FrlNP_729954.2 Drf_GBD 77..371 CDD:461886
Drf_FH3 374..567 CDD:461885 32/142 (23%)
FH2 687..1063 CDD:396655 94/417 (23%)
Fmn1XP_038962394.1 FH2 983..1380 CDD:214697 95/417 (23%)
Blue background indicates that the domain is not in the aligned region.

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