DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frl and daam-1

DIOPT Version :9

Sequence 1:NP_729954.2 Gene:Frl / 39561 FlyBaseID:FBgn0267795 Length:1183 Species:Drosophila melanogaster
Sequence 2:NP_503132.3 Gene:daam-1 / 186392 WormBaseID:WBGene00018976 Length:987 Species:Caenorhabditis elegans


Alignment Length:1156 Identity:266/1156 - (23%)
Similarity:465/1156 - (40%) Gaps:280/1156 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QHVRQPSLRSRSQQPMPTTD-ELDRRFAKVLASMDLPPDKAKLLRNYDDEKKWDMICDQEMVQAK 126
            |||....:.:    |.|... ::|:.|..::..:.|..:|.:.:.||..|||..::..|..:|.:
 Worm    27 QHVHDDVIFA----PAPLDPAKIDKDFECLVKELGLNEEKQQEMHNYSMEKKMSLLVSQHCLQTE 87

  Fly   127 DPPSHYLSKLRTYLDPKASRSHRLYLFYFLCQKRKMVGESTSTQVLRDLEISLRTNHIEWVKEFL 191
            | .||::..|:..                   ::..|.:|.:.:.|::|.|||||.:..:::.|:
 Worm    88 D-ASHFIGFLKNL-------------------QQSFVIDSNTIRQLQELVISLRTQNYSYLESFI 132

  Fly   192 DDTNQGLDALVDYLSFRLQMMRHEQRLQGVLCASEERLNLTNGGDGGEIVMGNSSSVSPGGGGGL 256
              ::.||..|.:.|:                                                  
 Worm   133 --SSSGLKLLTELLN-------------------------------------------------- 145

  Fly   257 LSHGNSTGHGLANGTLDSRQQHTMSYGFLRPTIADALDSPSLKRRSRHIAKLNMGAATDDIHVSI 321
                            ...||:|             |:.|:|                    ..:
 Worm   146 ----------------QCHQQYT-------------LEQPAL--------------------FFL 161

  Fly   322 MCLRAIMNNKYGFNMVI---QHREAINCIALSLIHKSLRTKALVLELLAAICLVKG-GHEIILGS 382
            ..|||::|:..|...|:   ||  .:..||.::..:..:.|.:.:|:|:.:|.:.. ||..:|.:
 Worm   162 YALRALLNSPNGRVAVLNDEQH--VLVSIARAVDFRDFKCKIVAIEILSGLCFIPDEGHIQVLRA 224

  Fly   383 FDNFKDVCQEKRRFQTLMEYFMNFEAFNID---FMVACMQFMNIVVHSVEDMN---YRVHLQYEF 441
            ......:..|:.|||||:.......:.:.|   ...|....:|.::.:....|   ||.||:.|.
 Worm   225 ITEVSTLLGERTRFQTLVSDLHRTYSTDRDTDRVRTAIFGLINALLRTGAAENCAIYRQHLRSEL 289

  Fly   442 TALGLDKYLERIRLTESEELKVQISAY----LDNVFDVAALMEDSETKTSA-------LERVQEL 495
            ..||:...||:.|...|:.|:..|..:    .::...:|.....|:...|:       .|.|..:
 Worm   290 LMLGMSTTLEQCREGASQRLEDHIDLFEMMRKEDEISLAGSCTSSDISMSSETSSPIDFESVVGM 354

  Fly   496 EDQLEREIDRNSEF---------------------LYKYAELESESLTLKTEREQLAMIRQKLEE 539
            .:.|..:::.:...                     |::..:|..:.|||:|....:..:...|:.
 Worm   355 AEALHIKLNHSQALPHFHSLLQHLFMVPSDDQHVPLWRLFDLILQHLTLQTTVNGMTDVNSPLQN 419

  Fly   540 EL---TVMQRMLQH-------NEQELKKRD-TLLHTKNMELQTLSRSLPRSASSGDGSLANGGLM 593
            .:   .::.|:..|       .|.|..|.| .|..|:.|||:.      |.|...||. |...:.
 Worm   420 HVDMSEILARLQNHCDYERIAKELEKAKEDMDLERTRIMELEN------RLADFSDGR-AGSRIS 477

  Fly   594 AGSTSGAASLTLPPPPPPMPASPTASSAAPPPPPPPAPPAPPPPPGFSPLGSPSGSLASTAPSPP 658
            ..|||.::|     |..|.|        :||..||..||||||||      .|.|.|.|      
 Worm   478 LASTSASSS-----PSDPCP--------SPPLLPPVCPPAPPPPP------PPIGGLTS------ 517

  Fly   659 HAPPMLSSFQPPPPPVAGFMPAPDGAMTIKRKVPTKYKLPTLNWIALKPNQVRGTIFNELDDEKI 723
                       ||......:|.|.|.|            .||||..|..::.|||:::.:|||||
 Worm   518 -----------PPKDALKNVPEPPGNM------------KTLNWQRLTLDKTRGTVWDGIDDEKI 559

  Fly   724 FKQIDFNEFEERFKIGIGGALRNGSNGTEVDGSLQSSKRFKRPD--NVSLLEHTRLRNIAISRRK 786
            :||:|..|        :.|.....|:..:.|.........:||.  |:::::..|.:|..|...|
 Worm   560 YKQLDLTE--------LSGCFAASSSHKDEDTDTLYGTINRRPQQANITVIDPRRYQNCTIMLSK 616

  Fly   787 LGMPIDDVIAAIHSLDLK-KLSLENVELLQKMVPTDAEVKSYKEYIIERKDQQLLTEEDKFMLQL 850
            |.:...::..|:.|:|.| ||..:.:|.:.|.:||..|:....|.:.:.....:|...|::|.::
 Worm   617 LKLSHKEIKQAMMSMDEKCKLPKDMIEQMLKFMPTKEELTQINESVQKHGSPTVLALADRYMYEI 681

  Fly   851 SRVERISSKLAIMNYMGNFVDSVHLISPQVQSIAGASTSLKQSRKFKAVLEIVLAFGNYLNSNKR 915
            |.:.|...:|..:|.:.:|.|.|..:.|.:|.:..|::|.:|:::|:.:|.|:||.|||||..||
 Worm   682 SSIPRFEQRLRCLNIIRSFHDRVEALVPFIQVVLKATSSCQQNKRFRQILTIILAIGNYLNFGKR 746

  Fly   916 -GPAYGFKLQSLDTLIDTKSTDKRS-SLLHYIVATIRAKFPELLNFESELYGTDKAASVALENVV 978
             |.||||::.|::.|.|.|:..:.. :|||::|..|..|:|:|..|:.:.....:||..:.....
 Worm   747 NGNAYGFEMASINKLADVKNALRNDRNLLHFLVNFIEKKYPDLTKFKKDFATVTEAARFSQSETA 811

  Fly   979 ADVQELEKGMDLVRKEAELRVKGAQTH--------------ILRDFLNNSEDKLKKIKSDLRHAQ 1029
            |:::.||:.:.:||||..|.....:..              :.:.|:..:..:...:....|..:
 Worm   812 AEIRNLEEALLIVRKELNLLESTTKVELPEHIPPENDRFALVAKAFIEKATAEYHNLDKMFREMK 876

  Fly  1030 EAFKECVEYF--GDSSRNADAAAFFALIVRFTRAFKQHDQ------ENEQRLRLEKAAALAASKK 1086
            ..|.:|.:||  ..|........||::|.:|...|.::.|      |.|::::.:..|....:||
 Worm   877 NKFSDCAKYFCYSPSGGVPVPEEFFSVINKFLNTFNEYHQQLWAEVEEEEKIKRQTIARSFLAKK 941

  Fly  1087 ENDQVLMRNKVNQKK---QQLPSNGALSLQEAVINELKSKAHSVREKKLLQ 1134
            ..    .|.|.|.|:   :||.|  ||...:....||.....|.|.||.::
 Worm   942 ST----TRRKENHKERDFEQLIS--ALQSGDIFKEELSRLRTSFRPKKTVK 986

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FrlNP_729954.2 Drf_GBD 77..371 CDD:283920 50/297 (17%)
Drf_FH3 374..567 CDD:283917 47/242 (19%)
FH2 687..1063 CDD:280362 106/396 (27%)
daam-1NP_503132.3 Drf_GBD 39..212 CDD:368864 49/295 (17%)
Drf_FH3 216..408 CDD:368862 38/191 (20%)
FH2 524..973 CDD:214697 127/474 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54599
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000085
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3069
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.950

Return to query results.
Submit another query.