DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6833 and REX4

DIOPT Version :9

Sequence 1:NP_001189105.1 Gene:CG6833 / 39559 FlyBaseID:FBgn0036405 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_014561.1 Gene:REX4 / 854075 SGDID:S000005440 Length:289 Species:Saccharomyces cerevisiae


Alignment Length:271 Identity:101/271 - (37%)
Similarity:145/271 - (53%) Gaps:20/271 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ANNKNTTDSTKNVVSPQ--HNQRKLQASMERLQVQQVNTSRRAAGSNWMAAAGGGAAAAAGSENQ 90
            |:..|.|.:.||..|.:  .|.:|:..::......|....:|..||..|..........:..|..
Yeast    12 ASESNPTSNGKNKQSNRKIRNVKKVSKTVNVSSTTQYAPRKRKNGSKIMDMVYNMNKEISKHEKD 76

  Fly    91 --DAKATESAP----------------LSKSARMRMKKKAHRNRILAMDCEMVGVGHNTRDDMLA 137
              :.|..|..|                :|:..|:...|.....:.:|||||.||||...::..||
Yeast    77 KLEGKVFEFNPNKANTSTTIKEPVKVGISEDTRINSNKSKEIGKYIAMDCEFVGVGPEGKESALA 141

  Fly   138 RVSIVNRMGHVLLDKYVKPRKEVTDYRTSVSGIRPQDIANGEDFAAVQNEVMKLIHGRILVGHGL 202
            |:||||..|||:||::||||::|.::||.||||:|:.:.|...|...|.:...::.|||||||.|
Yeast   142 RISIVNYFGHVVLDEFVKPREKVVEWRTWVSGIKPEHMKNAITFKEAQKKTADILEGRILVGHAL 206

  Fly   203 RNDLAVLGIRHPFHDIRDTSHYKPLCKLISNTHTPSLKRLTKAVLGQEIQTGEHNSVEDARAAMG 267
            ::||..|.:.||...:||||.:.|..||.:...|||||:||:.||...||.|||:|||||||.|.
Yeast   207 KHDLEALMLSHPKSLLRDTSRHLPFRKLYAKGKTPSLKKLTREVLKISIQEGEHSSVEDARATML 271

  Fly   268 IYNRVAVDWEK 278
            :|.:...::||
Yeast   272 LYKKEKTEFEK 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6833NP_001189105.1 DnaQ 100..>283 CDD:223916 84/179 (47%)
REX4_like 118..270 CDD:99847 78/151 (52%)
REX4NP_014561.1 REX4_like 122..274 CDD:99847 78/151 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343757
Domainoid 1 1.000 158 1.000 Domainoid score I877
eggNOG 1 0.900 - - E1_COG0847
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 167 1.000 Inparanoid score I1026
Isobase 1 0.950 - 0 Normalized mean entropy S1595
OMA 1 1.010 - - QHG53331
OrthoFinder 1 1.000 - - FOG0004095
OrthoInspector 1 1.000 - - oto99906
orthoMCL 1 0.900 - - OOG6_102721
Panther 1 1.100 - - LDO PTHR12801
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1084
SonicParanoid 1 1.000 - - X2840
TreeFam 1 0.960 - -
1514.740

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