DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6833 and AT5G40310

DIOPT Version :9

Sequence 1:NP_001189105.1 Gene:CG6833 / 39559 FlyBaseID:FBgn0036405 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_001330756.1 Gene:AT5G40310 / 834029 AraportID:AT5G40310 Length:357 Species:Arabidopsis thaliana


Alignment Length:263 Identity:81/263 - (30%)
Similarity:121/263 - (46%) Gaps:54/263 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SPQHNQRKLQASMERLQVQQVNTSRRAAGSNWMAAAGGGAAAAAGSENQDAKATESAPLSKSARM 106
            ||  |.|::.  .||.|:..|.:....            ..||.|..|   .:|.....|:|.  
plant    90 SP--NARRIH--QERCQLSNVTSGLMI------------RMAALGLRN---NSTIDYTSSRSP-- 133

  Fly   107 RMKKKAHRNRILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTSVSGIR 171
                     |::|:.|:|||.|.:...|:.|||.|.:...:|:...||||...||:||..::|||
plant   134 ---------RVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIR 189

  Fly   172 PQDIANGEDFAAVQNEVMKLI--------------HGRILVGHGLRNDLAVLGIRHPFHDIRDTS 222
            |:::.:.......|.:|.:.:              ..||||||||.|.|..|.:.:....||||:
plant   190 PENLRDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTA 254

  Fly   223 HYKPLCKLISNTHTPSLKRLTKAVLGQEIQTGEHNSVEDARAAMGIYNRVAVDWEKYLEKKRHQQ 287
            .|.||.|  |:..:.|||.||:|.||.:|..|..:..||..|.|.:|.|:     :|   ::|:.
plant   255 EYPPLMK--SSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRM-----RY---QKHRA 309

  Fly   288 QHY 290
            :.|
plant   310 EAY 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6833NP_001189105.1 DnaQ 100..>283 CDD:223916 66/196 (34%)
REX4_like 118..270 CDD:99847 60/165 (36%)
AT5G40310NP_001330756.1 C2H2 Zn finger 17..39 CDD:275371
C2H2 Zn finger 46..63 CDD:275371
REX4_like 136..300 CDD:99847 60/165 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0847
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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