DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6833 and AT3G27970

DIOPT Version :10

Sequence 1:NP_648689.1 Gene:CG6833 / 39559 FlyBaseID:FBgn0036405 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_189436.2 Gene:AT3G27970 / 822421 AraportID:AT3G27970 Length:357 Species:Arabidopsis thaliana


Alignment Length:268 Identity:87/268 - (32%)
Similarity:126/268 - (47%) Gaps:64/268 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SPQHNQRKLQASMERLQVQQVN---TSRRAAGSNWMAAAGGGAAAAAGSENQDAKATESAPLSKS 103
            ||  |.|::.  .||.|...||   |:|       |||.|          .:| ||......|:|
plant    90 SP--NSRRIH--QERCQFSSVNSGLTTR-------MAALG----------LRD-KAMIDYTSSRS 132

  Fly   104 ARMRMKKKAHRNRILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTSVS 168
            .           |::|:.|:|||.|.:...|:.|||.|.:...:|:...||||...||.||...:
plant   133 P-----------RVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETT 186

  Fly   169 GIRPQDIANGEDFAAVQNEVMKLI--------------HGRILVGHGLRNDLAVLGIRHPFHDIR 219
            ||||:::.:......||.::.:.:              ..||||||||.:||..|.:.:|...||
plant   187 GIRPENLRDAMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMIR 251

  Fly   220 DTSHYKPLCKL--ISNTHTPSLKRLTKAVLGQEIQTGEHNSVEDARAAMGIYNRVAVDWEKYLEK 282
            ||:.|.||.|.  :||    |||.||:|.||.::..|..:..||..|.|.:|.|:     :|   
plant   252 DTAKYPPLMKTSKLSN----SLKYLTQAYLGYDVHFGIQDPYEDCVATMRLYTRM-----RY--- 304

  Fly   283 KRHQQQHY 290
            ::|:.:.|
plant   305 QKHKIEAY 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6833NP_648689.1 REX4_like 118..270 CDD:99847 61/167 (37%)
AT3G27970NP_189436.2 C2H2 Zn finger 17..39 CDD:275371
C2H2 Zn finger 46..63 CDD:275371
REX4_like 136..300 CDD:99847 61/167 (37%)
Blue background indicates that the domain is not in the aligned region.

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