DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6833 and isg20l2

DIOPT Version :10

Sequence 1:NP_648689.1 Gene:CG6833 / 39559 FlyBaseID:FBgn0036405 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_001004997.1 Gene:isg20l2 / 448477 XenbaseID:XB-GENE-959111 Length:366 Species:Xenopus tropicalis


Alignment Length:177 Identity:79/177 - (44%)
Similarity:107/177 - (60%) Gaps:6/177 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 RILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTSVSGIRPQDIANGED 180
            :.:|:||||||.|.|.|...|||.||||..|.|:.|||:||:..||||||..||||.:.:.|...
 Frog   191 KAVAIDCEMVGTGPNGRVSNLARCSIVNWFGDVMYDKYIKPKSPVTDYRTRWSGIRREHLRNATP 255

  Fly   181 FAAVQNEVMKLIHGRILVGHGLRNDLAVLGIRHPFHDIRDTSHYKPLCKL---ISNTHTPSLKRL 242
            |...|.|::|:::|:::|||.:.||...|...||....||||.. ||...   :......|||||
 Frog   256 FDVAQKEILKILNGKVVVGHAIHNDYKALNYFHPQEMTRDTSKI-PLLNRKAGLPEKEVASLKRL 319

  Fly   243 TKAVLGQEIQTGE--HNSVEDARAAMGIYNRVAVDWEKYLEKKRHQQ 287
            :|.:|.::||||.  |:|||||:..|.:|..:.|:||:.|.....||
 Frog   320 SKLLLHKDIQTGSHGHSSVEDAKTTMELYRVIEVEWERELAAGHVQQ 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6833NP_648689.1 REX4_like 118..270 CDD:99847 72/156 (46%)
isg20l2NP_001004997.1 ISG20 193..349 CDD:99852 72/156 (46%)

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