DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6833 and prage

DIOPT Version :10

Sequence 1:NP_648689.1 Gene:CG6833 / 39559 FlyBaseID:FBgn0036405 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_001188528.1 Gene:prage / 31136 FlyBaseID:FBgn0283741 Length:852 Species:Drosophila melanogaster


Alignment Length:156 Identity:57/156 - (36%)
Similarity:88/156 - (56%) Gaps:13/156 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 ILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTSVSGIRPQDIANG-ED 180
            :.|:||||...|   |...:.:||:|...|.::.:.:|:|..::.||.|..|||...|:.:| :.
  Fly   685 VYALDCEMSYTG---RGLDVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSGAKS 746

  Fly   181 FAAVQNEVMKLIHG-RILVGHGLRNDLAVLGIRHPFHDIRDTSHYKPLCKLISNTHTPSLKRLTK 244
            .|.||.::::||.. .||:||||.|||..|.:.|  :.:.|||...|.|.  ...:..:|:.|||
  Fly   747 LAEVQRDLLQLITADTILIGHGLENDLRALRLVH--NTLIDTSISFPHCN--GFPYRRALRHLTK 807

  Fly   245 AVLGQEIQTGE----HNSVEDARAAM 266
            ..|.::||.|:    |:|.||:||.|
  Fly   808 VHLKRDIQAGDGTTGHSSFEDSRACM 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6833NP_648689.1 REX4_like 118..270 CDD:99847 57/155 (37%)
prageNP_001188528.1 PH-like <614..650 CDD:473070
REX1_like 686..837 CDD:99848 57/155 (37%)
Blue background indicates that the domain is not in the aligned region.

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