DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6833 and Trex2

DIOPT Version :9

Sequence 1:NP_001189105.1 Gene:CG6833 / 39559 FlyBaseID:FBgn0036405 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_036037.1 Gene:Trex2 / 24102 MGIID:1346343 Length:236 Species:Mus musculus


Alignment Length:186 Identity:41/186 - (22%)
Similarity:65/186 - (34%) Gaps:69/186 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 AAGSENQDAKATESAPLSKSARMRMKKKAHRNRILAMDCEMVGVGHNTRDD----MLARVSIVNR 144
            |.|..|.|   .|.|.:|..|       .||:          .:.:..|||    :|.||     
Mouse    17 ATGLPNMD---PEIAEISLFA-------VHRS----------SLENPERDDSGSLVLPRV----- 56

  Fly   145 MGHVLLDKY---VKPRKEVTDYRTSVSGIRPQDIAN-GEDFAAVQNEVMKLIHGRI--------L 197
                 |||.   :.|.:..|...:.::|:..:.:.: |:  |.....|::.:.|.:        |
Mouse    57 -----LDKLTLCMCPERPFTAKASEITGLSSESLMHCGK--AGFNGAVVRTLQGFLSRQEGPICL 114

  Fly   198 VGHG--------LRNDLAVLGIRHPFHDIRDTSHYKPLCKLISNTHTPSLKRLTKA 245
            |.|.        |..:|..||...|    :||.....|         |:|:.|.:|
Mouse   115 VAHNGFDYDFPLLCTELQRLGAHLP----QDTVCLDTL---------PALRGLDRA 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6833NP_001189105.1 DnaQ 100..>283 CDD:223916 35/170 (21%)
REX4_like 118..270 CDD:99847 31/152 (20%)
Trex2NP_036037.1 TREX1_2 10..204 CDD:99839 41/186 (22%)
Substrate binding. /evidence=ECO:0000250 16..17 41/186 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0847
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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