DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6833 and rexo4

DIOPT Version :9

Sequence 1:NP_001189105.1 Gene:CG6833 / 39559 FlyBaseID:FBgn0036405 Length:290 Species:Drosophila melanogaster
Sequence 2:XP_002665913.1 Gene:rexo4 / 100333127 ZFINID:ZDB-GENE-050411-124 Length:418 Species:Danio rerio


Alignment Length:311 Identity:106/311 - (34%)
Similarity:157/311 - (50%) Gaps:51/311 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RSGSANNKNTTDSTKNVVSPQHNQRKLQASMERLQVQQVNTSRRAAGSNWMAAAGGGAAAAAGSE 88
            :..:.|.|....|.|:...|:...:|.:.:::....:.....:....:|....:|.....|...:
Zfish    90 KDANVNGKQKPSSPKDSHKPEKRFKKAKETVKAESEKSKRVEKDGELTNGKEQSGHKQFKAEKRK 154

  Fly    89 NQDAK------------------------------------ATESAPLSK------------SAR 105
            |:|.|                                    .||:|.:.:            :.:
Zfish   155 NKDGKEKGMNKKSKAEEEEKKTAEPDLWFDDVDPDDIESALGTEAADIMRKRCGLAKCDPKNTEK 219

  Fly   106 MRMKKKAHR--NRILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTSVS 168
            |.:|:.|..  .|.:||||||||||:...|.:|||||:||..|..:.||||||.::||||||:||
Zfish   220 MLVKEHAFEGVTRAVAMDCEMVGVGYKGEDSILARVSLVNHFGKCIYDKYVKPTEKVTDYRTAVS 284

  Fly   169 GIRPQDIANGEDFAAVQNEVMKLIHGRILVGHGLRNDLAVLGIRHPFHDIRDTSHYKPLCKLISN 233
            ||||.||.||||...||.||.:::.|||||||.:.|||.:|.:.||...||||..|||..:.:.:
Zfish   285 GIRPDDIKNGEDIKTVQKEVAQILKGRILVGHAIHNDLKILLLDHPKKMIRDTQRYKPFRQKVKS 349

  Fly   234 THTPSLKRLTKAVLGQEIQTGEHNSVEDARAAMGIYNRVAVDWEKYLEKKR 284
            :. |:|:.|.:.:|..::|.|||:||:||:|.|.:|..|...||..|:..|
Zfish   350 SR-PALRNLCRQILNVQVQQGEHSSVQDAQATMRLYTMVRKQWEAELKAMR 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6833NP_001189105.1 DnaQ 100..>283 CDD:223916 90/196 (46%)
REX4_like 118..270 CDD:99847 81/151 (54%)
rexo4XP_002665913.1 DnaQ 231..>384 CDD:223916 82/153 (54%)
REX4_like 234..385 CDD:99847 81/151 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580538
Domainoid 1 1.000 171 1.000 Domainoid score I3705
eggNOG 1 0.900 - - E1_COG0847
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1562214at2759
OrthoFinder 1 1.000 - - FOG0004095
OrthoInspector 1 1.000 - - oto41502
orthoMCL 1 0.900 - - OOG6_102721
Panther 1 1.100 - - LDO PTHR12801
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1084
SonicParanoid 1 1.000 - - X2840
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.740

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