DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neurl4 and neurl1ab

DIOPT Version :9

Sequence 1:NP_648688.2 Gene:Neurl4 / 39558 FlyBaseID:FBgn0283503 Length:1780 Species:Drosophila melanogaster
Sequence 2:NP_001070176.2 Gene:neurl1ab / 767739 ZFINID:ZDB-GENE-060929-1210 Length:521 Species:Danio rerio


Alignment Length:549 Identity:119/549 - (21%)
Similarity:199/549 - (36%) Gaps:123/549 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FHTRCGRSIRLYNNNRMAQRSMRDFSHALVFSAEPLEDDVLFEVV---IEKKNTYWGGSIEIGVT 70
            ||.....|..:.:..:.:.|.:..|.:|:.|::.|:.   ::|.|   |.|....|.|::.:|.:
Zfish    36 FHANTKGSQIVMDKTQRSVRRIASFCNAITFTSRPVG---VYEQVRLKITKTQGCWSGALRVGFS 97

  Fly    71 AESPDD-----LELVACATAM-RNGTWVMSGIDVRKDGRRLFEFY---GTDLETLNENDRVGVMR 126
            ...|.:     |...||...: ..|.|          ||.|.|.:   ||.|....:|......|
Zfish    98 IVDPSNISSAWLPRFACPDLVSEQGFW----------GRALPEEHCEEGTILSFWLDNIGRVFYR 152

  Fly   127 TSGNDLVFYVNGESQGVAAKNMPKPLWALVDLYG--RCVQVSLC------------PRDGSGSGE 177
            .:|...:|:.:|...|       :|:|.::|:||  |.|.:..|            ..:|.....
Zfish   153 VNGGSPIFFFSGVPAG-------EPVWGIIDIYGLTRGVHLLDCKMLPAEYLSPAVTHEGMDDWN 210

  Fly   178 LLDSPLQQPLQQVVQNLDVAMN-VNIVVDSDAWMQGNGSVSGADDRLCFHTRCGSLVKLSPN--- 238
            |.....:..||:.:.:...:.| :|:::...           ..|.|.||:..||.::|...   
Zfish   211 LSSGCSEFDLQEDLPSFSSSPNALNLLLSHQ-----------LSDDLHFHSVHGSALRLLTEHIA 264

  Fly   239 FRSAERRRPLDEFNNGVVMTHRPLRDNELFEIRIDKLVDKWSGSIEVGVTTHNPAVL---HFPAT 300
            .|...||...     .:|.||||||..|...:::..   :.||.:..|.|:.|||.:   |.|..
Zfish   265 VRYYNRREAC-----ALVFTHRPLRCGECVFLKVSL---RSSGFLSYGFTSCNPAHVNSKHLPVD 321

  Fly   301 MTNMRSGTIMMSGCGILTNGKGTRRQYGEFN--LDELREGDRVGMMRKANGNL---HNYINGQDQ 360
            ...:..                 |:::..|:  ...|..||.:|....|.|.:   ||....:.:
Zfish   322 PDELLD-----------------RKEFWAFSSMTSALVGGDIIGFRATAEGEVLVSHNGGRARRE 369

  Fly   361 GVAATRAPSTLWGVIDLYGMTIKVTIVDRDEREQQNLVTRRNNIVAGMTACSSGAGAQH-TQHQQ 424
            ......||  ||.:..|.....:::|:.         .:|..:.....|..|..:.|.| :.:|.
Zfish   370 MCVDNSAP--LWMIFHLQTHIKQISILG---------TSRGYSPSCSETQRSIFSDASHLSANQI 423

  Fly   425 HSGT----PTLSLLSPESEMNAAGAA-GGLSETISSTRAIARND-----DRL--TFHHICGTHAT 477
            ||.|    ...|...|.|..::.|.| |.||....|..|:...:     ||.  :..:.||....
Zfish   424 HSTTIRRCTDSSQPRPHSLSSSLGTAFGSLSSESPSCCALTGEECLICCDRPVDSVLYACGHMCV 488

  Fly   478 VTQSGRTALRPNAADDFNNGVVLTRRPLR 506
            .:..|     ....:..|....:.|.|:|
Zfish   489 CSDCG-----VKLTETSNPSCPVCRSPIR 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neurl4NP_648688.2 NEUZ 5..126 CDD:128856 29/128 (23%)
SPRY_NHR_like 8..168 CDD:293945 41/172 (24%)
NEUZ 221..345 CDD:128856 33/131 (25%)
SPRY_NHR_like 225..387 CDD:293945 40/172 (23%)
NEUZ 464..587 CDD:128856 9/45 (20%)
SPRY_NHR_like 467..629 CDD:293945 7/40 (18%)
NEUZ 653..777 CDD:128856
SPRY_NHR_like 656..818 CDD:293945
SPRY_NHR_like 854..1016 CDD:293945
SPRY_NHR_like 1063..1220 CDD:293945
neurl1abNP_001070176.2 NEUZ 33..154 CDD:128856 30/130 (23%)
SPRY 36..187 CDD:295394 41/170 (24%)
Neuralized 36..101 CDD:284568 15/67 (22%)
NEUZ 244..362 CDD:128856 35/142 (25%)
SPRY 247..394 CDD:295394 40/173 (23%)
Neuralized 248..310 CDD:284568 20/69 (29%)
zf-C3HC4_3 466..514 CDD:290631 9/52 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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