DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neurl4 and neurl1aa

DIOPT Version :9

Sequence 1:NP_648688.2 Gene:Neurl4 / 39558 FlyBaseID:FBgn0283503 Length:1780 Species:Drosophila melanogaster
Sequence 2:XP_021330967.1 Gene:neurl1aa / 561943 ZFINID:ZDB-GENE-090311-3 Length:572 Species:Danio rerio


Alignment Length:528 Identity:113/528 - (21%)
Similarity:187/528 - (35%) Gaps:167/528 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RCG---RSIRLYNNNR--------MAQRSMR---DFSHALVFSAEPLEDDVLFEVV---IEKKNT 59
            :||   .|..|::.|.        :||||::   .|.:|:.||..|:   .|:|.|   |.||..
Zfish    51 QCGGVLMSPLLFHPNAKGSQIVMDLAQRSVKRQASFCNAITFSNRPI---ALYEQVRLKITKKQC 112

  Fly    60 YWGGSIEIGVTAE-----SPDDLELVACATAM-RNGTWVMSGIDVRKDGRRLFEFYGTDLETLNE 118
            .|.|::.:|.|::     :||.|...||...: ::|.|..:..:...:...|..|:      :::
Zfish   113 CWSGALRLGFTSKDPSRINPDSLPKYACPDLVSQSGFWAKALPEEFANEGNLISFW------VDK 171

  Fly   119 NDRVGVMRTSGNDLVFYVNGESQGVAAKNMPKPLWALVDLYG--RCVQ----------------- 164
            ..||.......:.::|:     .||   ...:|||||:|:||  |.||                 
Zfish   172 KGRVFYRINDSSPMLFF-----SGV---RTTEPLWALIDVYGLTRGVQLLESEVVPPDLLRPRSF 228

  Fly   165 -------------------VSLC----PRDGSGSGELLDSPLQQPLQQVVQNLDVAMNVNIVVDS 206
                               ||||    |:|.|.. .|..:|:..|:.|...|...:..:...::.
Zfish   229 TTVRGSTSLRREADTSRLSVSLCDLNLPQDDSRL-RLPPAPVTCPIPQNSMNSQQSSLLPHTLEC 292

  Fly   207 DAWMQGNGSVSGADDRLCFHTRCGSLVKLSPNFRSAERRRPLDEFNNGVVMTHRPLRDNELFEIR 271
            |               :.||...|:.:|:......|......:|  ..:|.|.||||..|...|:
Zfish   293 D---------------IRFHQLRGAHIKILNEQTVARSEHNREE--RTLVFTDRPLRIGETIFIK 340

  Fly   272 IDKLVDKWSGSIEVGVTTHNPAVL------HFPATMTNMRSGTIMMSGCGILTNGKGTRRQYGEF 330
            :.|......||:..|||:.:||||      :.|..:.:.:.   ..:.|.:.|            
Zfish   341 VIKSSPARFGSLSYGVTSCDPAVLRPSDLPYNPEALVDRKE---FWAVCRVPT------------ 390

  Fly   331 NLDELREGDRVGMMRKANGNL---HNYINGQDQGVAATRAPSTLWGVIDLYGMTIKVTIVDR--- 389
               .|:..|.:|.:....|.:   ||..|...|.......|  ||....|:|...::.|:..   
Zfish   391 ---ALQSADILGFLVTQEGEVILSHNGTNVGMQVCVDNSRP--LWMFFGLHGAVTQLRILGSTFL 450

  Fly   390 -DEREQQNLVTRRNNIVAGMTACSSGAGAQHTQHQQHSGTPTLSLL-----SPESEMNAAGAAGG 448
             |.|:..:                             .|:|:.|..     |||..::..|.:..
Zfish   451 GDARDPSS-----------------------------PGSPSASPSGLCGGSPEPSLHERGCSAA 486

  Fly   449 LSETISST 456
            ...:...|
Zfish   487 FCSSTEGT 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neurl4NP_648688.2 NEUZ 5..126 CDD:128856 35/136 (26%)
SPRY_NHR_like 8..168 CDD:293945 51/216 (24%)
NEUZ 221..345 CDD:128856 30/129 (23%)
SPRY_NHR_like 225..387 CDD:293945 40/170 (24%)
NEUZ 464..587 CDD:128856
SPRY_NHR_like 467..629 CDD:293945
NEUZ 653..777 CDD:128856
SPRY_NHR_like 656..818 CDD:293945
SPRY_NHR_like 854..1016 CDD:293945
SPRY_NHR_like 1063..1220 CDD:293945
neurl1aaXP_021330967.1 NEUZ 59..180 CDD:128856 32/129 (25%)
Neuralized 296..446 CDD:311244 41/171 (24%)
mRING-HC-C3HC5_NEU1A 517..560 CDD:319699
modified RING-HC finger (C3HC5-type) 519..558 CDD:319699
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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