DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and SSA4

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_011029.3 Gene:SSA4 / 856840 SGDID:S000000905 Length:642 Species:Saccharomyces cerevisiae


Alignment Length:695 Identity:205/695 - (29%)
Similarity:333/695 - (47%) Gaps:111/695 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVGGFK 68
            :|||.|.....||...:..:|.:|||...|.|||:|||...:|:||.|||||...|..|||...|
Yeast     5 VGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQAAMNPHNTVFDAK 69

  Fly    69 RLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSAAAM 133
            ||:||||:||.|.::....|.:|..:| |...::|.|.||.:.|.||::::|:.||:|||:...:
Yeast    70 RLIGRKFDDPEVTNDAKHYPFKVIDKG-GKPVVQVEYKGETKTFTPEEISSMILTKMKETAENFL 133

  Fly   134 QTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRNVIF 198
            .|:|.|.|:..|.:|.:::|:|..||..||||||||::||.||.|:|||..|.   ..|..||:.
Yeast   134 GTEVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKK---SQKEHNVLI 195

  Fly   199 VDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNARANLR 262
            .|.|..:...|..:..:|..::.|:..| .:||.|.|..|.::.|:||:.:.|.:..||.|:..|
Yeast   196 FDLGGGTFDVSLLSIDEGVFEVKATAGDTHLGGEDFDSRLVNFLAEEFKRKNKKDLTTNQRSLRR 260

  Fly   263 LLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAESKL 327
            |.|..|:.|:.:| :|.:..:.|:...:.||..:|:.|::.|||||.:.:...:..:::||:|||
Yeast   261 LRTAAERAKRTLS-SSAQTSIEIDSLFEGIDFYTSITRARFEELCADLFRSTLEPVEKVLADSKL 324

  Fly   328 QLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIMSP--------- 382
            ....|..:.:||||:|||.|::|:...|| |..:.::|.||||:.|||:|.||::.         
Yeast   325 DKSQIDEIVLVGGSTRIPKVQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTGDQSSTTQDL 389

  Fly   383 ---AVRVREFGVTDIQNYAVKVLWDSEGSAAP-GEIEIFPQYHASPFSRLLTINRKGPFNVSIVY 443
               .|.....|:........|::  ...|..| .:.|:|..|         ..|:.|.. :.:..
Yeast   390 LLLDVAPLSLGIETAGGIMTKLI--PRNSTIPTKKSEVFSTY---------ADNQPGVL-IQVFE 442

  Fly   444 GQQVPYPDQT-IGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAEQ 507
            |::....|.. :|.:::..:.|..||..| :::...|:.|||:.:|:   |||            
Yeast   443 GERTRTKDNNLLGKFELSGIPPAPRGVPQ-IEVTFDIDANGILNVSA---VEK------------ 491

  Fly   508 AASEEKPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKASK 572
                        .||:               :|..|.::..|:                      
Yeast   492 ------------GTGK---------------SNKITITNDKGR---------------------- 507

  Fly   573 ATELPLECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFERYV 637
                        .|..|:.....:..|....|::|.:|:.|||.||.:.:.::|.:....|:..|
Yeast   508 ------------LSKEDIDKMVAEAEKFKAEDEQEAQRVQAKNQLESYAFTLKNSVSENNFKEKV 560

  Fly   638 VEAEREKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPI 682
            .|.:..|:.:...|..||| :..:....:.|..|.:.|....:||
Yeast   561 GEEDARKLEAAAQDAINWL-DASQAASTEEYKERQKELEGVANPI 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 150/378 (40%)
HSP70 3..682 CDD:278441 203/693 (29%)
SSA4NP_011029.3 PTZ00009 4..642 CDD:240227 205/695 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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