DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70Cb and SSZ1

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_011931.2 Gene:SSZ1 / 856461 SGDID:S000001106 Length:538 Species:Saccharomyces cerevisiae


Alignment Length:532 Identity:136/532 - (25%)
Similarity:239/532 - (44%) Gaps:71/532 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VIGIDFGNESCYVAAAR-SGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVGG 66
            ||||.|||.|..:|... ...::.:||....||.||.:::.|:....|..|..|.:.|.|||:..
Yeast     5 VIGITFGNTSSSIAYINPKNDVDVIANPDGERAIPSALSYVGEDEYHGGQALQQLIRNPKNTIIN 69

  Fly    67 FKRLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNY-LGEDQHFGPEQLTAMLFTKLKETSA 130
            |:..:|..|:...|.......|| ||.  ||.:|..::. .|:::....:::.:....:||..:.
Yeast    70 FRDFIGLPFDKCDVSKCANGAPA-VEV--DGKVGFVISRGEGKEEKLTVDEVVSRHLNRLKLAAE 131

  Fly   131 AAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFE-DKPR 194
            ..:.:.|.:.|:..|..|:..::.||..:|...||.:::.:||.:|..||:.    :.|. :|..
Yeast   132 DYIGSAVKEAVLTVPTNFSEEQKTALKASAAKIGLQIVQFINEPSAALLAHA----EQFPFEKDV 192

  Fly   195 NVIFVDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNAR 258
            ||:..|||.....|:..|...|...:||:..| .:||.::|..|.:|||.|||::|:.|.:.|||
Yeast   193 NVVVADFGGIRSDAAVIAVRNGIFTILATAHDLSLGGDNLDTELVEYFASEFQKKYQANPRKNAR 257

  Fly   259 ANLRLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLA 323
            :..:|.......||.:| |:|...::|:...|..|..:|:.|.:.|.:...|..:.......::|
Yeast   258 SLAKLKANSSITKKTLS-NATSATISIDSLADGFDYHASINRMRYELVANKVFAQFSSFVDSVIA 321

  Fly   324 ESKLQLDDIHSVEIVGGSSRIPSVKQLIEQVF----------NKPASTTLNQDEAVSRGAALQCA 378
            :::|...||.:|.:.||.|..|.:...:|...          ||.||.  |.:|..:.|||||..
Yeast   322 KAELDPLDIDAVLLTGGVSFTPKLTTNLEYTLPESVEILGPQNKNASN--NPNELAASGAALQAR 384

  Fly   379 IMSPAVRVREFGVTDIQNYAVKVLWDSEGSAAP-GEIEIFPQYH-------ASPFSRLLTINR-K 434
            ::|      ::...::......|:.::.....| |.|....::|       :.|..:.||:.: |
Yeast   385 LIS------DYDADELAEALQPVIVNTPHLKKPIGLIGAKGEFHPVLLAETSFPVQKKLTLKQAK 443

  Fly   435 GPFNVSIVYGQQ-------VPYPDQTIGVWKVKDVKPTERGEGQD-----------------VKL 475
            |.|.:.:..|..       .|.|       |.::.:..:..|..|                 ::|
Yeast   444 GDFLIGVYEGDHHIEEKTLEPIP-------KEENAEEDDESEWSDDEPEVVREKLYTLGTKLMEL 501

  Fly   476 KVRINNNGIVLI 487
            .:: |.||:.:|
Yeast   502 GIK-NANGVEII 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 113/391 (29%)
HSP70 3..682 CDD:278441 136/532 (26%)
SSZ1NP_011931.2 ScSsz1p_like_NBD 4..384 CDD:212674 113/388 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.