DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70Cb and SSC1

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_012579.1 Gene:SSC1 / 853503 SGDID:S000003806 Length:654 Species:Saccharomyces cerevisiae


Alignment Length:710 Identity:190/710 - (26%)
Similarity:311/710 - (43%) Gaps:130/710 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SVIGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGK-KRIIGVAAKNQQVTNMKNTVG 65
            ||||||.|..:..||.......:.:.|....|.|||.|||..: :|::|:.||.|.|.|.:||:.
Yeast    31 SVIGIDLGTTNSAVAIMEGKVPKIIENAEGSRTTPSVVAFTKEGERLVGIPAKRQAVVNPENTLF 95

  Fly    66 GFKRLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSA 130
            ..|||:||:|.|..||.::..:|.::....:|...::    ...|.:.|.|:...:..|:|||:.
Yeast    96 ATKRLIGRRFEDAEVQRDIKQVPYKIVKHSNGDAWVE----ARGQTYSPAQIGGFVLNKMKETAE 156

  Fly   131 AAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRN 195
            |.:...|.:.|:..|.:|.:::|:|..||.||.||||||::||.||.|||||..|:|     .:.
Yeast   157 AYLGKPVKNAVVTVPAYFNDSQRQATKDAGQIVGLNVLRVVNEPTAAALAYGLEKSD-----SKV 216

  Fly   196 VIFVDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYK----INAKT 255
            |...|.|..:...|......|..::.::..| .:||.|.|:    |..:|...|:|    |:.:.
Yeast   217 VAVFDLGGGTFDISILDIDNGVFEVKSTNGDTHLGGEDFDI----YLLREIVSRFKTETGIDLEN 277

  Fly   256 NARANLRLLTEIEKLKKQMSAN-STKLPLNIECFLDDID----VSSSMQRSQMEELCAPVLQRVE 315
            :..|..|:....||.|.::|:. ||:  :|:.....|..    ::....|:|.|.|.||:::|..
Yeast   278 DRMAIQRIREAAEKAKIELSSTVSTE--INLPFITADASGPKHINMKFSRAQFETLTAPLVKRTV 340

  Fly   316 QTFKRLLAESKLQLDDIHSVEIVGGSSRIPSVKQLIEQVFNKPASTTLNQDEAVSRGAALQCAIM 380
            ...|:.|.::.|...||..|.:|||.||:|.|.:.::.:|.|..|..:|.||||:.|||:|.|::
Yeast   341 DPVKKALKDAGLSTSDISEVLLVGGMSRMPKVVETVKSLFGKDPSKAVNPDEAVAIGAAVQGAVL 405

  Fly   381 SPAVRVREFGVTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHASPFSRLLTINRKGPFNVSIVYGQ 445
            |..       |||:....|..|  |.|....|.:          |:||:      |.|.:|    
Yeast   406 SGE-------VTDVLLLDVTPL--SLGIETLGGV----------FTRLI------PRNTTI---- 441

  Fly   446 QVPYPDQTIGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAEQAAS 510
                              ||                             ||....:.|||.|.:.
Yeast   442 ------------------PT-----------------------------KKSQIFSTAAAGQTSV 459

  Fly   511 EEKPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGAD-------KKK 568
            |.:          ...|::|...:|:...|.:.|..|.......:::..|...||       :.|
Yeast   460 EIR----------VFQGERELVRDNKLIGNFTLAGIPPAPKGVPQIEVTFDIDADGIINVSARDK 514

  Fly   569 KASKATELPLECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPF 633
            ..:|.:.:.: ..:.|.|..::........|....|:...:.|:..|..::...|..|.|:  .|
Yeast   515 ATNKDSSITV-AGSSGLSENEIEQMVNDAEKFKSQDEARKQAIETANKADQLANDTENSLK--EF 576

  Fly   634 ERYVVEAEREKIVSQLNDLENWL--YEDGEDCERDIYTSRLQALHQKTDPIKLRASDYEQ 691
            |..|.:||.:|:..|:..|:..:  .:.||:...:...::.:.|  :|..:||    :||
Yeast   577 EGKVDKAEAQKVRDQITSLKELVARVQGGEEVNAEELKTKTEEL--QTSSMKL----FEQ 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 130/389 (33%)
HSP70 3..682 CDD:278441 185/698 (27%)
SSC1NP_012579.1 dnaK 30..633 CDD:234715 190/710 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.