DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70Cb and SSQ1

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_013473.1 Gene:SSQ1 / 851084 SGDID:S000004361 Length:657 Species:Saccharomyces cerevisiae


Alignment Length:728 Identity:165/728 - (22%)
Similarity:298/728 - (40%) Gaps:177/728 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VIGIDFGNESCYVAAARSGGIETLA----NDYSLRATPSFVAFDGK---------KRIIGVAAKN 54
            |||||.|..:..||..|....:..|    ||...|.|||.||||.|         |.::|:|||.
Yeast    30 VIGIDLGTTNSAVAYIRDSNDKKSATIIENDEGQRTTPSIVAFDVKSSPQNKDQMKTLVGMAAKR 94

  Fly    55 QQVTNMKNTVGGFKRLLGRKFNDPHVQHELTSIPARV---EARGDGSIGIKVNYLGEDQHF--GP 114
            |...|.:||....|||:||.|||..||.::..:|.::   |:.|..       ||......  .|
Yeast    95 QNAINSENTFFATKRLIGRAFNDKEVQRDMAVMPYKIVKCESNGQA-------YLSTSNGLIQSP 152

  Fly   115 EQLTAMLFTKLKETSAAAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATAL 179
            .|:.::|...||:||...:..:||..||..|.:|.:::|:|..||.::|||||||::||.||.||
Yeast   153 SQIASILLKYLKQTSEEYLGEKVNLAVITVPAYFNDSQRQATKDAGKLAGLNVLRVINEPTAAAL 217

  Fly   180 AYGFYKNDLFEDKPRN--VIFVDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYF 241
            ::|      .:||..|  :...|.|..:...|......|..::.|:..| .:||.|.|..:.:|.
Yeast   218 SFG------IDDKRNNGLIAVYDLGGGTFDISILDIEDGVFEVRATNGDTHLGGEDFDNVIVNYI 276

  Fly   242 AKEF-QERYKINAK--TNARANLRLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQM 303
            ...| .|..:|..:  |..|..::.|.::.:..|...::..|..:.:........:...|...::
Yeast   277 IDTFIHENPEITREEITKNRETMQRLKDVSERAKIDLSHVKKTFIELPFVYKSKHLRVPMTEEEL 341

  Fly   304 EELCAPVLQRVEQTFKRLLAESKLQLDDIHSVEIVGGSSRIPSVKQLIEQVFNKPASTTLNQDEA 368
            :.:...::.|.....|:.|.::.::.:||..|.:|||.:|:|.::.:::.:|.|..::::|.||.
Yeast   342 DNMTLSLINRTIPPVKQALKDADIEPEDIDEVILVGGMTRMPKIRSVVKDLFGKSPNSSVNPDET 406

  Fly   369 VSRGAALQCAIMSPAVR-------------VREFGVTDIQNYAVKVLWDSEGSAAPGEIEIFPQY 420
            |:.|||:|..|:|..::             :..||                |:.:|    :.|:.
Yeast   407 VALGAAIQGGILSGEIKNVLLLDVTPLTLGIETFG----------------GAFSP----LIPRN 451

  Fly   421 HASPFSRL----LTINRKGPFNVSIVYGQQ-VPYPDQTIGVWKVKDVKPTERGEGQDVKLKVRIN 480
            ...|..:.    ..::.:...::.:..|:: :...::.||..|:..:.|..:|..| :.:...|:
Yeast   452 TTVPVKKTEIFSTGVDGQAGVDIKVFQGERGLVRNNKLIGDLKLTGITPLPKGIPQ-IYVTFDID 515

  Fly   481 NNGIVLISSATLVEKKEAEEAAAAAEQAASEEKPGDQTNNTGEPADGQQEAYCENEDDNNTSTAS 545
            .:||:.:|:|                                |.:.|:|::              
Yeast   516 ADGIINVSAA--------------------------------EKSSGKQQS-------------- 534

  Fly   546 SPGGQGWAQRVKGWFGSGADKKKKASKATELPLECTTHGFSPVDLSNYTQQESKMIGNDQKETER 610
                                       .|.:|    ..|.|..:::...::.:.....|....:|
Yeast   535 ---------------------------ITVIP----NSGLSEEEIAKLIEEANANRAQDNLIRQR 568

  Fly   611 IDAKNALEEFVYDMRNKLQGGPFERYVVEAEREKIVSQLNDLENWLYEDGEDCERDIYTSRLQAL 675
            ::..:..:..:.|..|.     |:||      ||::|...:..| :.||            ::||
Yeast   569 LELISKADIMISDTENL-----FKRY------EKLISSEKEYSN-IVED------------IKAL 609

  Fly   676 HQKTDPIKLRASD 688
            .|.....|...:|
Yeast   610 RQAIKNFKANEND 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 121/401 (30%)
HSP70 3..682 CDD:278441 163/720 (23%)
SSQ1NP_013473.1 dnaK 29..656 CDD:234715 165/728 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.